Gene: AT4G39810

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G39810
  • Transcript Identifier AT4G39810.1
  • Gene Type Coding gene
  • Location Chr4 : 18474608-18475735 : negative

Gene Family Information

  • ID HOM05D001764
  • #Genes/#Species 368/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G39810.1
  • Alias NEN4,NAC45/86-DEPENDENT EXONUCLEASE-DOMAIN PROTEIN 4
  • uniprot F4JJ23

Descriptions

  • Description Polynucleotidyl transferase, ribonuclease H-like superfamily protein
  • Computational description Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G74390.1); Has 1538 Blast hits to 1532 proteins in 632 species: Archae - 0; Bacteria - 1272; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
Gene Ontologynucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008408
IBA
Gene Ontology3'-5' exonuclease activity1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013520 Exonuclease, RNase T/DNA polymerase III
IPR012337 Ribonuclease H-like superfamily
IPR036397 Ribonuclease H superfamily
Mapman id Description
35.1 not assigned.annotated