Gene: AT4G39820

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G39820
  • Transcript Identifier AT4G39820.2
  • Gene Type Coding gene
  • Location Chr4 : 18476698-18477981 : negative

Gene Family Information

  • ID HOM05D006521
  • #Genes/#Species 123/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G39820.2
  • uniprot O65669

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); Has 285 Blast hits to 281 proteins in 117 species: Archae - 4; Bacteria - 22; Metazoa - 124; Fungi - 26; Plants - 36; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005886
HDA
Gene Ontologyplasma membrane1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
22.3.4.7.3 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.TRAPP-III-complex-specific components.component TRAPPC12