Gene: AT4G31200

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G31200
  • Transcript Identifier AT4G31200.2
  • Gene Type Coding gene
  • Location Chr4 : 15162323-15164568 : negative

Gene Family Information

  • ID HOM05D005511
  • #Genes/#Species 139/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G31200.2
  • uniprot O49570

Descriptions

  • Description SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
  • Computational description SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), SWAP/Surp (InterPro:IPR000061), RNA polymerase II, large subunit, CTD (InterPro:IPR006569); Has 15613 Blast hits to 10676 proteins in 664 species: Archae - 6; Bacteria - 799; Metazoa - 6418; Fungi - 3065; Plants - 3018; Viruses - 214; Other Eukaryotes - 2093 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006874
IEA
GOA Databasecellular calcium ion homeostasis
GO:0006874
IBA
Gene Ontologycellular calcium ion homeostasis1
GO:0006874
IEA
InterProcellular calcium ion homeostasis
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
Gene OntologyRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0048471
IBA
Gene Ontologyperinuclear region of cytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000061 SWAP/Surp
IPR008942 ENTH/VHS
IPR035967 SWAP/Surp superfamily
IPR006569 CID domain
IPR039037 Calcium homeostasis endoplasmic reticulum protein
Mapman id Description
35.1 not assigned.annotated