Gene: AT4G29120

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G29120
  • Transcript Identifier AT4G29120.1
  • Gene Type Coding gene
  • Location Chr4 : 14350861-14351865 : positive

Gene Family Information

  • ID HOM05D001008
  • #Genes/#Species 601/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G29120.1
  • uniprot Q9SZE1

Descriptions

  • Description 6-phosphogluconate dehydrogenase family protein
  • Computational description 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, phosphogluconate dehydrogenase (decarboxylating) activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT1G71170.1); Has 17656 Blast hits to 17632 proteins in 2309 species: Archae - 156; Bacteria - 10896; Metazoa - 453; Fungi - 508; Plants - 334; Viruses - 3; Other Eukaryotes - 5306 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006574
IEA
Gene Ontologyvaline catabolic process
GO:0009083
IEA
GOA Databasebranched-chain amino acid catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008442
IEA
Gene Ontology3-hydroxyisobutyrate dehydrogenase activity
GO:0050661
IEA
Gene OntologyNADP binding
GO:0050661
IEA
InterProNADP binding
GO:0051287
IEA
Gene OntologyNAD binding
GO:0051287
IEA
InterProNAD binding
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006115 6-phosphogluconate dehydrogenase, NADP-binding
IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
IPR036291 NAD(P)-binding domain superfamily
IPR013328 6-phosphogluconate dehydrogenase, domain 2
IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain
IPR015815 3-hydroxyisobutyrate dehydrogenase-related
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor