Gene: AT4G21550

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G21550
  • Transcript Identifier AT4G21550.2
  • Gene Type Coding gene
  • Location Chr4 : 11463104-11467960 : positive

Gene Family Information

  • ID HOM05D001107
  • #Genes/#Species 553/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G21550.2
  • symbol VAL3
  • uniprot O65420

Descriptions

  • Description VP1/ABI3-like 3
  • Computational description VP1/ABI3-like 3 (VAL3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 886 Blast hits to 853 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 879; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
ISS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0048366
IMP
Gene Ontologyleaf development2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
IEA
Gene OntologyDNA-binding transcription factor activity1
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D001107

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003340 B3 DNA binding domain
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR044800 B3 domain-containing transcription factor LEC2-like
Mapman id Description
12.3.6.2.3 Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.associated factors.regulatory protein (VAL)
15.5.5.4 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (LAV-VAL)