Gene: AT4G20930
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G20930
- Transcript Identifier AT4G20930.2
- Gene Type Coding gene
- Location Chr4 : 11198627-11200403 : negative
Gene Family Information
- ID HOM05D001008
- #Genes/#Species 601/100
- Phylogenetic origin
- ID ORTHO05D009098
- #Genes/#Species 109/88
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G20930.2
- uniprot Q9SUC0
Descriptions
- Description 6-phosphogluconate dehydrogenase family protein
- Computational description 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, valine catabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase (InterPro:IPR011548), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 2 (TAIR:AT1G17650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009083 | IEA | GOA Database | branched-chain amino acid catabolic process | |
| GO:0006574 | IBA IEA | Gene Ontology | valine catabolic process | 1 |
| GO:0006573 | IMP | Gene Ontology | valine metabolic process | 2 |
| GO:0006551 | IMP | Gene Ontology | leucine metabolic process | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
| GO:0050661 | IEA | Gene Ontology | NADP binding | |
| GO:0050661 | IEA | InterPro | NADP binding | |
| GO:0008442 | IDA IBA IEA | Gene Ontology | 3-hydroxyisobutyrate dehydrogenase activity | 1 2 |
| GO:0008442 | IEA | InterPro | 3-hydroxyisobutyrate dehydrogenase activity | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0051287 | IEA | Gene Ontology | NAD binding | |
| GO:0051287 | IEA | InterPro | NAD binding | |
| GO:0016616 | IBA | Gene Ontology | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 |
| GO:0043621 | IDA | Gene Ontology | protein self-association | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005739 | ISM | Gene Ontology | mitochondrion | |
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029154 | 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain |
| IPR013328 | 6-phosphogluconate dehydrogenase, domain 2 |
| IPR036291 | NAD(P)-binding domain superfamily |
| IPR011548 | 3-hydroxyisobutyrate dehydrogenase |
| IPR006115 | 6-phosphogluconate dehydrogenase, NADP-binding |
| IPR015815 | 3-hydroxyisobutyrate dehydrogenase-related |
| IPR008927 | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily |