Gene: AT4G20920

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G20920
  • Transcript Identifier AT4G20920.3
  • Gene Type Coding gene
  • Location Chr4 : 11194177-11197577 : negative

Gene Family Information

  • ID HOM05D004256
  • #Genes/#Species 167/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G20920.3
  • uniprot F4JVP4

Descriptions

  • Description double-stranded RNA-binding domain (DsRBD)-containing protein
  • Computational description double-stranded RNA-binding domain (DsRBD)-containing protein; FUNCTIONS IN: double-stranded RNA binding; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: RNA-binding protein Lupus La (InterPro:IPR006630), Double-stranded RNA-binding (InterPro:IPR001159); BEST Arabidopsis thaliana protein match is: double-stranded RNA binding protein-related / DsRBD protein-related (TAIR:AT4G20910.2); Has 124 Blast hits to 119 proteins in 45 species: Archae - 0; Bacteria - 65; Metazoa - 3; Fungi - 2; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034587
IBA
Gene OntologypiRNA metabolic process1
GO:0030422
IBA
Gene Ontologyproduction of siRNA involved in RNA interference1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008173
IBA
Gene OntologyRNA methyltransferase activity1
GO:0008171
IBA
Gene OntologyO-methyltransferase activity1
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0005634
IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040813 Small RNA 2'-O-methyltransferase Hen1, La-motif C-terminal domain
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR014720 Double-stranded RNA-binding domain
IPR040870 HEN1, double-stranded RNA binding domain 2
Mapman id Description
16.9.3 RNA processing.mRNA silencing.miRNA/siRNA methyltransferase (HEN1)