Gene: AT3G16310

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G16310
  • Transcript Identifier AT3G16310.1
  • Gene Type Coding gene
  • Location Chr3 : 5526593-5528106 : negative

Gene Family Information

  • ID HOM05D004877
  • #Genes/#Species 152/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G16310.1
  • uniprot O04326

Descriptions

  • Description mitotic phosphoprotein N' end (MPPN) family protein
  • Computational description mitotic phosphoprotein N' end (MPPN) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MPPN (InterPro:IPR007846), Nucleoporin, NUP53 (InterPro:IPR017389); Has 220 Blast hits to 220 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 5; Plants - 57; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051028
IEA
GOA DatabasemRNA transport
GO:0006913
IEA
GOA Databasenucleocytoplasmic transport
GO:0006913
IEA
InterPronucleocytoplasmic transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006999
IBA
Gene Ontologynuclear pore organization1
GO:0006607
IBA
Gene OntologyNLS-bearing protein import into nucleus1
GO:0006355
IBA
Gene Ontologyregulation of transcription, DNA-templated1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0017056
IEA
GOA Databasestructural constituent of nuclear pore
GO:0017056
IBA
Gene Ontologystructural constituent of nuclear pore1
GO:0017056
IEA
InterProstructural constituent of nuclear pore
GO:0003697
IBA
Gene Ontologysingle-stranded DNA binding1
GO:0005543
IBA
Gene Ontologyphospholipid binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031965
IEA
Gene Ontologynuclear membrane
GO:0031965
IEA
InterPronuclear membrane
GO:0005634
IEA
GOA Databasenucleus
GO:0005643
IEA
GOA Databasenuclear pore
GO:0044613
IBA
Gene Ontologynuclear pore central transport channel1
GO:0044615
IBA
Gene Ontologynuclear pore nuclear basket1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017389 Nucleoporin, NUP53
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR007846 RNA-recognition motif (RRM) Nup35-type domain
Mapman id Description
23.5.1.1.6.5 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP35)