Gene: AT3G16320

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G16320
  • Transcript Identifier AT3G16320.2
  • Gene Type Coding gene
  • Location Chr3 : 5529534-5534465 : positive

Gene Family Information

  • ID HOM05D003301
  • #Genes/#Species 207/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G16320.2
  • symbol CDC27a
  • uniprot Q06AN9

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description CDC27a; FUNCTIONS IN: binding; INVOLVED IN: regulation of cell division, cell cycle, gamete generation, regulation of unidimensional cell growth; LOCATED IN: anaphase-promoting complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: CDC27 family protein (TAIR:AT2G20000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045842
IBA
Gene Ontologypositive regulation of mitotic metaphase/anaphase transition1
GO:0051301
IEA
GOA Databasecell division
GO:0051301
IBA
Gene Ontologycell division1
GO:0007049
IEA
GOA Databasecell cycle
GO:0007091
IBA
Gene Ontologymetaphase/anaphase transition of mitotic cell cycle1
GO:0031145
IBA
Gene Ontologyanaphase-promoting complex-dependent catabolic process1
GO:0016567
IBA
IEA
Gene Ontologyprotein ubiquitination1
GO:0051510
IGI
Gene Ontologyregulation of unidimensional cell growth2
GO:0051302
IGI
Gene Ontologyregulation of cell division2
GO:0007276
IGI
Gene Ontologygamete generation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0005680
IPI
IBA
Gene Ontologyanaphase-promoting complex1 2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR019734 Tetratricopeptide repeat
IPR001440 Tetratricopeptide repeat 1
IPR013105 Tetratricopeptide repeat 2
Mapman id Description
13.3.3.1.1.2.1 Cell cycle organisation.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin protein ligase complex.arc lamp subcomplex.component APC3