Gene: AT3G04460

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G04460
  • Transcript Identifier AT3G04460.1
  • Gene Type Coding gene
  • Location Chr3 : 1186641-1189094 : positive

Gene Family Information

  • ID HOM05D004899
  • #Genes/#Species 151/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G04460.1
  • symbol PEX12
  • Alias APM4,ABERRANT PEROXISOME MORPHOLOGY 4,ATPEX12,PEROXIN-12
  • uniprot Q9M841

Descriptions

  • Description peroxin-12
  • Computational description peroxin-12 (PEX12); FUNCTIONS IN: zinc ion binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, peroxisome organization, embryonic morphogenesis; LOCATED IN: peroxisomal membrane, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Pex, N-terminal (InterPro:IPR006845), Peroxisome assembly, p12 (InterPro:IPR017375); Has 364 Blast hits to 340 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 134; Plants - 57; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006513
IDA
IBA
Gene Ontologyprotein monoubiquitination1 2
GO:0006625
IEA
Gene Ontologyprotein targeting to peroxisome
GO:0006625
IEA
InterProprotein targeting to peroxisome
GO:0015031
IEA
GOA Databaseprotein transport
GO:0007031
IEA
GOA Databaseperoxisome organization
GO:0007031
IMP
Gene Ontologyperoxisome organization3
GO:0016558
IDA, IMP
IBA
Gene Ontologyprotein import into peroxisome matrix1 4 5
GO:0006635
IMP
Gene Ontologyfatty acid beta-oxidation6
GO:0048598
IMP
Gene Ontologyembryonic morphogenesis3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0008022
IEA
Gene Ontologyprotein C-terminus binding
GO:0008022
IEA
InterProprotein C-terminus binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004842
IDA
IBA
Gene Ontologyubiquitin-protein transferase activity1 2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005779
IBA
IEA
Gene Ontologyintegral component of peroxisomal membrane1
GO:0005779
IEA
InterProintegral component of peroxisomal membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005777
IEA
GOA Databaseperoxisome
GO:0005777
IDA
Gene Ontologyperoxisome3
GO:0005778
IEA
GOA Databaseperoxisomal membrane
GO:0005778
IDA
Gene Ontologyperoxisomal membrane4
GO:1990429
IBA
Gene Ontologyperoxisomal importomer complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006845 Pex, N-terminal
IPR017375 Peroxisome assembly protein 12
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
23.4.1.3.2 Protein translocation.peroxisome.importomer translocation system.receptor monoubiquitination system.ubiquitin ligase component Pex12