Gene: AT3G04450
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G04450
- Transcript Identifier AT3G04450.2
- Gene Type Coding gene
- Location Chr3 : 1184422-1186264 : positive
Gene Family Information
- ID HOM05D000184
- #Genes/#Species 2081/100
- Phylogenetic origin
- ID ORTHO05D000032
- #Genes/#Species 3442/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G04450.2
- uniprot F4J3P7
Descriptions
- Description Homeodomain-like superfamily protein
- Computational description Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G29000.2); Has 1755 Blast hits to 1738 proteins in 93 species: Archae - 0; Bacteria - 13; Metazoa - 34; Fungi - 3; Plants - 1652; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
- Computational description Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G29000.2).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISS IEA | Gene Ontology | DNA-binding transcription factor activity | 1 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |