Gene: AT2G20420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G20420
  • Transcript Identifier AT2G20420.1
  • Gene Type Coding gene
  • Location Chr2 : 8805574-8807858 : positive

Gene Family Information

  • ID HOM05D004007
  • #Genes/#Species 175/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G20420.1
  • uniprot O82662

Descriptions

  • Description ATP citrate lyase (ACL) family protein
  • Computational description ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006099
IBA
IEA
Gene Ontologytricarboxylic acid cycle1
GO:0006099
IEA
InterProtricarboxylic acid cycle
GO:0046686
IEP
GOA Databaseresponse to cadmium ion
GO:0006104
IBA
Gene Ontologysuccinyl-CoA metabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000287
IEA
GOA Databasemagnesium ion binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0005524
IDA
IEA
GOA DatabaseATP binding
GO:0005524
HDA
Gene OntologyATP binding2
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016874
IEA
GOA Databaseligase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005507
IDA
GOA Databasecopper ion binding
GO:0005507
HDA
Gene Ontologycopper ion binding3
GO:0004775
IEA
Gene Ontologysuccinate-CoA ligase (ADP-forming) activity
GO:0004776
IBA
Gene Ontologysuccinate-CoA ligase (GDP-forming) activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA, HDA
ISM, IBA
Gene Ontologymitochondrion1 4 5
GO:0042709
IBA
Gene Ontologysuccinate-CoA ligase complex1
GO:0005794
RCA
Gene OntologyGolgi apparatus6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type
IPR016102 Succinyl-CoA synthetase-like
IPR013815 ATP-grasp fold, subdomain 1
IPR005809 Succinate--CoA synthetase, beta subunit
IPR005811 ATP-citrate lyase/succinyl-CoA ligase
Mapman id Description
2.3.5.2 Cellular respiration.tricarboxylic acid cycle.succinyl-CoA ligase heterodimer.subunit beta