Gene: AT1G51310

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G51310
  • Transcript Identifier AT1G51310.1
  • Gene Type Coding gene
  • Location Chr1 : 19019185-19021735 : negative

Gene Family Information

  • ID HOM05D002268
  • #Genes/#Species 297/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G51310.1
  • uniprot F4I824

Descriptions

  • Description tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  • Computational description transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases; FUNCTIONS IN: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, transferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), tRNA-specific 2-thiouridylase (InterPro:IPR004506); Has 8544 Blast hits to 8538 proteins in 2600 species: Archae - 0; Bacteria - 5626; Metazoa - 134; Fungi - 60; Plants - 58; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0008033
IEA
InterProtRNA processing
GO:0032259
IEA
GOA Databasemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061708
IEA
GOA DatabasetRNA-5-taurinomethyluridine 2-sulfurtransferase
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000049
IEA
GOA DatabasetRNA binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016740
IEA
InterProtransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0016783
IEA
GOA Databasesulfurtransferase activity
GO:0016783
IEA
InterProsulfurtransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004506 tRNA-specific 2-thiouridylase
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR023382 Adenine nucleotide alpha hydrolase-like domains
Mapman id Description
16.11.3.1.1.1 RNA processing.organelle machinery.RNA modification.tRNA modification.MnmA pathway.tRNA thiouridylase