Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 1.1e-295 1019.2 498 100.0
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 1.9e-281 971.8 501 94.8
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 3.9e-274 947.6 498 93.0
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 1.5e-273 945.7 499 92.6
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 6.0e-267 923.7 498 90.6
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 5.3e-263 910.6 499 89.2
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 1.1e-257 892.9 500 88.2
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 5.3e-255 884.0 498 87.3
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 1.6e-251 872.5 500 87.0
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 2.3e-250 868.6 501 86.4
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 1.1e-249 866.3 501 86.4
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 1.9e-249 865.5 501 86.0
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 1.9e-249 865.5 501 86.0
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 1.2e-246 856.3 499 84.4
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 9.1e-223 776.9 455 85.1
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 1.4e-207 726.5 475 75.2
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 1.7e-205 719.5 480 74.0
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 3.8e-205 718.4 427 79.2
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 3.8e-205 718.4 427 79.2
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 1.5e-204 716.5 464 74.6
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 7.2e-204 714.1 486 72.6
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 2.7e-203 712.2 424 78.8
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 2.7e-203 712.2 486 72.8
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 3.6e-203 711.8 467 74.9
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 4.7e-203 711.4 477 73.8
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 4.7e-203 711.4 459 76.0
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 8.0e-203 710.7 436 78.2
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 3.0e-202 708.8 491 72.7
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 6.8e-202 707.6 480 72.5
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 6.8e-202 707.6 448 75.0
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 8.8e-202 707.2 464 75.9
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 8.8e-202 707.2 409 81.4
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 2.6e-201 705.7 513 72.5
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 7.5e-201 704.1 476 73.5
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 9.8e-201 703.7 457 75.3
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 2.2e-200 702.6 417 79.6
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 4.9e-200 701.4 428 77.1
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 1.8e-199 699.5 464 75.0
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 3.1e-199 698.7 492 71.3
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 4.1e-199 698.4 481 71.3
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 4.1e-199 698.4 468 72.4
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 5.4e-199 698.0 502 70.7
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 7.0e-199 697.6 412 79.4
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 9.1e-199 697.2 484 72.7
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 9.1e-199 697.2 502 70.7
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 1.2e-198 696.8 479 71.8
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 1.2e-198 696.8 467 73.0
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 1.6e-198 696.4 358 92.2
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 2.0e-198 696.0 465 72.9
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 4.5e-198 694.9 417 78.7
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 4.5e-198 694.9 434 76.7
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 1.0e-197 693.7 416 78.4
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 1.0e-197 693.7 406 80.0
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 5.0e-197 691.4 448 75.4
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 5.0e-197 691.4 490 70.6
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 6.6e-197 691.0 505 68.5
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 6.6e-197 691.0 476 71.4
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 1.5e-196 689.9 426 76.5
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 1.5e-196 689.9 476 71.6
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 3.3e-196 688.7 453 74.8
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 1.6e-195 686.4 519 67.1
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 1.6e-195 686.4 483 70.6
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 2.1e-195 686.0 409 78.0
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 2.1e-195 686.0 428 76.6
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 8.0e-195 684.1 404 80.4
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 1.4e-194 683.3 495 67.9
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 2.3e-194 682.6 456 72.8
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 3.0e-194 682.2 486 70.2
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 2.0e-193 679.5 483 69.4
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 1.3e-192 676.8 469 72.1
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 2.2e-192 676.0 410 77.8
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 1.4e-191 673.3 473 70.4
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 1.8e-191 672.9 505 67.1
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 5.9e-190 667.9 471 67.7
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 1.7e-189 666.4 421 76.0
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 8.6e-189 664.1 451 72.3
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 2.5e-188 662.5 479 68.3
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 2.1e-187 659.4 492 71.1
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 1.0e-186 657.1 508 64.8
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 1.0e-186 657.1 481 68.2
RcHm_v2.0_Chr7g0231131 Rosa chinensis HOM05D002268 ORTHO05D006937 1.4e-186 656.8 472 69.5
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 2.0e-185 652.9 449 72.4
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 4.4e-185 651.7 486 68.3
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 5.8e-185 651.4 465 68.8
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 5.8e-185 651.4 460 70.7
FAN18G3947 Fragaria x ananassa HOM05D002268 ORTHO05D006937 2.9e-184 649.0 440 71.6
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 2.9e-184 649.0 453 71.5
FvH4_5g33050 Fragaria vesca HOM05D002268 ORTHO05D006937 4.9e-184 648.3 452 71.0
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 1.3e-181 640.2 394 75.6
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 5.0e-181 638.3 471 70.1
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 5.2e-178 628.2 398 72.4
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 2.0e-177 626.3 488 63.7
Sabra16G0158600 Salix brachista HOM05D002268 ORTHO05D006937 3.4e-177 625.5 487 66.9
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 3.9e-173 612.1 358 80.2
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 1.2e-169 600.5 466 63.1
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 2.3e-165 586.3 632 53.8
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 3.6e-163 578.9 474 62.9
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 5.2e-162 575.1 380 73.7
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 1.4e-154 550.4 398 67.6
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 1.8e-146 523.5 430 62.6
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 2.5e-135 486.5 262 85.1
SEGI_13867 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 3.2e-135 486.1 344 67.4
Mapoly0129s0019 Marchantia polymorpha HOM05D002268 ORTHO05D006937 9.3e-135 484.6 424 56.8
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 1.2e-134 484.2 272 83.1
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 1.0e-133 481.1 445 56.0
SMO331G0070 Selaginella moellendorffii HOM05D002268 ORTHO05D006937 2.3e-133 479.9 376 61.2
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 7.4e-132 474.9 420 56.2
Ciclev10006706m.g Citrus clementina HOM05D002268 ORTHO05D006937 1.8e-125 453.8 488 53.9
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 1.1e-124 451.1 254 83.5
FAN08G3580 Fragaria x ananassa HOM05D002268 ORTHO05D006937 5.3e-122 442.2 308 71.8
TAR369G0718 Trochodendron aralioides HOM05D002268 ORTHO05D006937 1.5e-121 440.7 267 79.0
PRCOL_00001138 Prasinoderma coloniale HOM05D002268 ORTHO05D006937 5.9e-113 412.1 379 54.9
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 1.7e-112 410.6 327 64.5
Peaxi162Scf00004g00224 Petunia axillaris HOM05D002268 ORTHO05D006937 3.8e-112 409.5 252 75.8
MCO02G416 Micromonas commoda HOM05D002268 ORTHO05D006937 8.5e-112 408.3 433 49.4
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 6.7e-101 372.1 382 50.8
Cre14.g628000 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D006937 1.8e-98 364.0 529 40.3
Actinidia26439 Actinidia chinensis HOM05D002268 ORTHO05D006937 2.7e-97 360.1 232 75.4
CBR_g40742 Chara braunii HOM05D002268 ORTHO05D006937 1.1e-90 338.2 402 46.8
Gohir.A05G069100 Gossypium hirsutum HOM05D002268 ORTHO05D006937 1.4e-90 337.8 275 65.1
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 1.2e-84 318.2 171 88.9
unitig_21.g20901 Utricularia gibba HOM05D002268 ORTHO05D006937 5.0e-72 276.2 198 68.2
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 9.8e-68 261.9 188 66.0
BcaC01g01262 Brassica carinata HOM05D002268 ORTHO05D006937 1.6e-65 254.6 285 51.6
C03p89950 Brassica napus HOM05D002268 ORTHO05D001336 1.2e-62 245.0 195 66.2
BolC3t21314H Brassica oleracea HOM05D002268 ORTHO05D006937 2.7e-57 227.3 195 62.6
BraA05t20874Z Brassica rapa HOM05D002268 ORTHO05D006937 2.3e-53 214.2 160 74.4
MSTRG.17590 Avicennia marina HOM05D002268 ORTHO05D006937 1.5e-52 211.5 230 55.7
Hma1.2p1_0861F.1_g229720 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 2.4e-50 204.1 138 71.0
CBR_g19922 Chara braunii HOM05D002268 ORTHO05D021278 2.5e-47 194.1 310 35.8
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis HOM05D002268 ORTHO05D021278 1.1e-45 188.7 321 35.8
CSS0037797 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 1.5e-44 184.9 115 73.0
Pp3c4_6690 Physcomitrium patens HOM05D002268 ORTHO05D021278 2.4e-42 177.6 384 31.5
SEGI_07269 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 1.0e-40 172.2 143 60.8
PRCOL_00001597 Prasinoderma coloniale HOM05D002268 ORTHO05D021278 5.6e-39 166.4 400 31.2
MCO12G105 Micromonas commoda HOM05D002268 ORTHO05D021278 8.1e-38 162.5 350 34.6
Mapoly0010s0199 Marchantia polymorpha HOM05D002268 ORTHO05D021278 1.2e-36 158.7 271 36.5
C03p89940 Brassica napus HOM05D002268 ORTHO05D040778 1.9e-34 151.4 117 70.9
BolC3t21313H Brassica oleracea HOM05D002268 ORTHO05D040778 2.3e-32 144.4 113 70.8
Lsat_1_v5_gn_1_117501 Lactuca sativa HOM05D002268 ORTHO05D006937 2.5e-31 141.0 74 78.4
A08p02920 Brassica napus HOM05D002268 ORTHO05D099342 9.3e-26 122.5 95 66.3
MELO3C029180.2 Cucumis melo HOM05D002268 ORTHO05D168145 8.7e-24 115.9 253 35.2
Nn3g21873 Nelumbo nucifera HOM05D002268 ORTHO05D006937 2.0e-20 104.8 91 61.5
SEGI_39418 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 5.8e-20 103.2 101 50.5
Duzib150G1137 Durio zibethinus HOM05D002268 ORTHO05D006937 4.2e-18 97.1 99 59.6
MELO3C032733.2 Cucumis melo HOM05D002268 ORTHO05D170637 6.9e-13 79.7 108 46.3
C01p11650 Brassica napus HOM05D026831 ORTHO05D011195 2.9e-11 74.3 95 45.3
BolC2t12207H Brassica oleracea HOM05D002268 ORTHO05D042165 2.9e-11 74.3 95 45.3
C02p10780 Brassica napus HOM05D002268 ORTHO05D042165 1.2e-09 68.9 152 35.5
Actinidia23968 Actinidia chinensis HOM05D002268 ORTHO05D006937 1.0e-08 65.9 49 71.4
MELO3C035704.2 Cucumis melo HOM05D002268 ORTHO05D166817 2.5e-07 61.2 146 29.5
QL06p040831 Quercus lobata HOM05D002268 ORTHO05D006937 3.3e-07 60.8 31 83.9


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