Gene: AL4G24300
General Information
Structural Information
- Species Arabidopsis lyrata
- Gene Identifier AL4G24300
- Transcript Identifier AL4G24300.t1
- Gene Type Coding gene
- Location scaffold_4 : 13633343-13635288 : positive
Gene Family Information
- ID HOM05D003015
- #Genes/#Species 229/96
- Phylogenetic origin
- ID ORTHO05D003733
- #Genes/#Species 207/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id AL4G24300.v2.1
- synonym fgenesh1_pg.C_scaffold_4001061
- pacid 35924816
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G29580 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G29580 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036855 | Zinc finger, CCCH-type superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR035979 | RNA-binding domain superfamily |
| IPR000571 | Zinc finger, CCCH-type |
| IPR032297 | Torus domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR039171 | Pre-mRNA-splicing factor Cwc2/Slt11 |
| Mapman id | Description |
|---|---|
| 16.2.5.2.1 | RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component MAC5 |