Gene: THA.LOC104810855

General Information

Structural Information

  • Species Tarenaya hassleriana
  • Gene Identifier THA.LOC104810855
  • Transcript Identifier THA.XM_010537301.1
  • Gene Type Coding gene
  • Location NW_010965304.1 : 656957-661593 : positive

Gene Family Information

  • ID HOM05D004298
  • #Genes/#Species 166/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • GeneID 104810855
  • RefSeq XM_010537301.1
  • RefSeq XP_010535603.1
  • tid rna13027
  • id gene8549
  • gene LOC104810855

Descriptions

  • Description 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044237
IEA
InterProcellular metabolic process
GO:0016114
IEA
InterProterpenoid biosynthetic process
GO:0008299
IEA
InterProisoprenoid biosynthetic process
GO:0009617
ISO
PLAZA Integrative Orthologyresponse to bacterium AT5G60600
GO:0019288
ISO
PLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway AT5G60600
GO:0009862
ISO
PLAZA Integrative Orthologysystemic acquired resistance, salicylic acid mediated signaling pathway AT5G60600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046429
IEA
InterPro4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
GO:0005506
IEA
InterProiron ion binding
GO:0051539
ISO
PLAZA Integrative Orthology4 iron, 4 sulfur cluster binding AT5G60600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G60600
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G60600
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G60600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011005 Dihydropteroate synthase-like
IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type
IPR017178 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical
Mapman id Description
9.1.2.7 Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.4-hydroxy-3-methylbut-2-enyl diphosphate synthase