Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen05g029940 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | FUNCTIONS IN: methyltransferase activity, RNA binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p , Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site | BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Spenn-ch05 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G15240 LG-6 + View
Aethionema arabicum Aa31LG7G14430 LG-7 + View
Acer truncatum Atru.chr3.1361 chr3 + View
Actinidia chinensis Actinidia06544 Lachesis_group16 - View
Actinidia chinensis Actinidia19997 Lachesis_group11 + View
Arabidopsis lyrata AL7G12310 scaffold_7 - View
Arabidopsis lyrata AL4G11900 scaffold_4 - View
Avicennia marina MSTRG.2578 ScioBoG_102835_HRSCAF_103059 - View
Aquilegia oxysepala Aqoxy6G00734 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.56KYQ9 K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G6ARYH K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein%3B FUNCTIONS IN: methyltransferase activity%2C RNA binding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678)%2C Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p%2C conserved site (InterPro:IPR018314)%3B BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G40000.1)%3B Has 8976 Blast hits to 8942 proteins in 2412 species: Archae - 298%3B Bacteria - 6215%3B Metazoa - 583%3B Fungi - 307%3B Plants - 251%3B Viruses - 0%3B Other Eukaryotes - 1322 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT4G40000 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein%3B FUNCTIONS IN: methyltransferase activity%2C RNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678)%2C Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p%2C conserved site (InterPro:IPR018314)%3B BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G22400.1)%3B Has 8835 Blast hits to 8804 proteins in 2376 species: Archae - 282%3B Bacteria - 6104%3B Metazoa - 590%3B Fungi - 311%3B Plants - 234%3B Viruses - 0%3B Other Eukaryotes - 1314 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC07g41076 ChrC07 + View
Brassica carinata BcaNung00924 Contig372 - View
Brassica carinata BcaC02g08664 ChrC02 + View
Brassica napus A04p16880 A04 - View
Brassica napus A01p00900 A01 - View
Brassica napus C08p40800 C08 + View
Brassica napus C01p01050 C01 - View
Brassica oleracea BolC8t51644H C8 + View
Brassica oleracea BolC1t00102H C1 - View
Brassica oleracea BolC4t26736H C4 - View
Brassica rapa BraA09t41152Z A09 + View
Brassica rapa BraA04t17321Z A04 - View
Brassica rapa BraA01t00089Z A01 - View
Beta vulgaris EL10Ac6g14824 K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) Chr6_EL10_PGA_scaffold0 + View
Capsicum annuum CAN.G151.12 PGAv.1.6.scaffold151 + View
Capsicum annuum CAN.G905.28 PGAv.1.6.scaffold905 + View
Cannabis sativa CANSAT01G1547 NC_044373.1 - View
Cicer arietinum L. Ca_16514_v3 Ca_LG5_v3 + View
Cicer arietinum L. Ca_17757_v3 Ca_LG6_v3 - View
Corylus avellana Haze_24864 Similar to YUC10: Probable indole-3-pyruvate monooxygenase YUCCA10 (Arabidopsis thaliana OX%3D3702) 8 + View
Coffea canephora Cc07_g14750 Putative tRNA (cytosine(34)-C(5))-methyltransferase chr7 + View
Citrus clementina Ciclev10024895m.g scaffold_7 + View
Ceratophyllum demersum CDE10G0727 8 + View
Carpinus fangiana Cfa002613 Cfa01 + View
Cardamine hirsuta CARHR113590 Ribosomal RNA small subunit methyltransferase F Chr4 - View
Cardamine hirsuta CARHR246680 Ribosomal RNA small subunit methyltransferase F Chr7 + View
Carya illinoinensis CiPaw.03G144800 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase Chr03 - View
Citrullus lanatus ClCG01G018610 Ribosomal RNA small subunit methyltransferase F CG_Chr01 + View
Cucumis melo MELO3C007741.2 tRNA (Cytosine(34)-C(5))-methyltransferase chr08 + View
Corchorus olitorius COL.COLO4_27282 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p AWUE01019526.1 - View
Carica papaya Cpa.g.sc55.83 supercontig_55 + View
Chenopodium quinoa AUR62003252 NSUN2: tRNA C_Quinoa_Scaffold_1000 - View
Chenopodium quinoa AUR62027218 NSUN2: tRNA C_Quinoa_Scaffold_2924 + View
Capsella rubella Carub.0007s0196 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase scaffold_7 - View
Cucumis sativus L. CsaV3_6G045280 tRNA (Cytosine(34)-C(5))-methyltransferase chr6 + View
Daucus carota DCAR_003477 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv13221 GWHABJS00000014 + View
Durio zibethinus Duzib147G1622 NW_019168470.1 - View
Eucalyptus grandis Eucgr.I00532 Chr09 - View
Eucalyptus grandis Eucgr.H04746 Chr08 + View
Erythranthe guttata Migut.H02342 scaffold_8 + View
Eutrema salsugineum Thhalv10024482m.g K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) scaffold_1 - View
Eutrema salsugineum Thhalv10000050m.g K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) scaffold_15 - View
Fragaria x ananassa FAN19G0293 PTHR22808//PTHR22808:SF14 - NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1-4 + View
Fragaria x ananassa FAN23G1395 K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) Fvb1-3 + View
Fragaria x ananassa FAN28G0091 K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) Fvb1-1 - View
Fragaria x ananassa FAN26G2141 K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) Fvb1-2 + View
Fragaria vesca FvH4_1g20370 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase Fvb1 + View
Gossypium hirsutum Gohir.A02G129100 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase A02 - View
Gossypium hirsutum Gohir.D03G039900 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase D03 - View
Glycine max Glyma.11G241400 K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) Gm11 - View
Glycine max Glyma.05G176167 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase Gm05 + View
Glycine max Glyma.18G015566 Gm18 + View
Glycine max Glyma.08G133700 K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) Gm08 + View
Gossypium raimondii Gorai.003G041000 Chr03 - View
Lupinus albus Lalb_Chr07g0185301 K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) Lalb_Chr07 - View
Lotus japonicus Lj4g0011115 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase chr4 - View
Lotus japonicus Lj6g0024442 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase chr6 + View
Lonicera japonica Lj2C541T5 GWHAAZE00000002 + View
Malus domestica MD01G1034300 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Chr01 - View
Malus domestica MD15G1321500 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Chr15 + View
Manihot esculenta Manes.12G131000 Chromosome12 + View
Medicago truncatula Medtr3g086950 tRNA (cytosine(34)-C(5))-methyltransferase-like protein chr3 + View
Medicago truncatula Medtr8g089980 tRNA (cytosine(34)-C(5))-methyltransferase-like protein chr8 + View
Nelumbo nucifera Nn5g30027 chr5 + View
Nicotiana tabacum Nitab4.5_0002604g0040 tRNA (C5-cytosine) methyltransferase, NCL1, Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, RNA (C5-cytosine) methyltransferase, Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site Nitab4.5_0002604 - View
Nicotiana tabacum Nitab4.5_0000128g0250 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site, tRNA (C5-cytosine) methyltransferase, NCL1, RNA (C5-cytosine) methyltransferase Nitab4.5_0000128 + View
Nicotiana tabacum Nitab4.5_0000241g0270 RNA (C5-cytosine) methyltransferase, tRNA (C5-cytosine) methyltransferase, NCL1, Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site Nitab4.5_0000241 - View
Olea europaea Oeu056635.1 chr18 - View
Oryza sativa ssp. japonica Os08g0484400 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain containing protein. chr08 - View
Petunia axillaris Peaxi162Scf00381g00061 tRNA (cytosine(34)-C(5))-methyltransferase Peaxi162Scf00381 + View
Petunia axillaris Peaxi162Scf00044g00112 tRNA (cytosine(34)-C(5))-methyltransferase Peaxi162Scf00044 - View
Punica granatum PGR102G0950 NC_045129.1 + View
Punica granatum PGR004G2195 NC_045131.1 - View
Prunus persica Prupe.6G191700 Pp06 - View
Pisum sativum Psat7g057040 16S rRNA methyltransferase RsmB/F chr7LG7 + View
Pisum sativum Psat5g090760 16S rRNA methyltransferase RsmB/F chr5LG3 - View
Papaver somniferum PSO541G6125 NC_039363.1 + View
Papaver somniferum PSO675G0282 NC_039358.1 + View
Populus trichocarpa Potri.007G096100 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase Chr07 - View
Phaseolus vulgaris Phvul.001G253400 K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) Chr01 - View
Phaseolus vulgaris Phvul.002G261300 K15334 - multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] (NCL1, TRM4) Chr02 + View
Quercus lobata QL06p048297 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0112501 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0166900 chr10 - View
Salvia bowleyana SalBow3G0841 GWHASIU00000006 + View
Salvia bowleyana SalBow3G1582 GWHASIU00000006 + View
Salix brachista Sabra07G0079200 GWHAAZH00000007 - View
Simmondsia chinensis Sc03g0000100 GWHAASQ00000003 - View
Sechium edule Sed0002614 LG14 + View
Sechium edule Sed0018597 LG10 - View
Solanum lycopersicum Solyc11g010110.3 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q8L601_ARATH) SL4.0ch11 - View
Schrenkiella parvula Sp7g35870 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase ch7-6 + View
Solanum tuberosum PGSC0003DMG400016157 NOL1/NOP2/sun family protein ST4.03ch11 + View
Trochodendron aralioides TAR628G1304 group5 - View
Theobroma cacao Thecc.01G096900 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104807678 tRNA (cytosine(34)-C(5))-methyltransferase-like NW_010963495.1 + View
Trifolium pratense TPR.G6241 Tp57577_TGAC_v2_LG3 + View
Trifolium pratense TPR.G15995 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI74G0107 NC_052234.1 + View
Tripterygium wilfordii TWI77G0296 NC_052236.1 + View
Vaccinium macrocarpon vmacro12976 Similar to NSUN2: RNA cytosine-C(5)-methyltransferase NSUN2 (Gallus gallus OX%3D9031) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G3398 CM024069.1 + View
Vigna mungo VMungo1383G1326 CM024070.1 - View
Vitis vinifera GSVIVG01003416001 chr7 - View
Zea mays Zm00001eb315780 Zm00001e034437 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 7 + View