Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G3000 LG-3 + View
Acer truncatum Atru.chr12.849 chr12 + View
Actinidia chinensis Actinidia38871 Lachesis_group17 + View
Actinidia chinensis Actinidia34803 Lachesis_group6 - View
Arabidopsis lyrata AL3G21730 scaffold_3 + View
Avicennia marina MSTRG.390 ScioBoG_102831_HRSCAF_103044 - View
Arabidopsis thaliana AT3G10400 RNA recognition motif and CCHC-type zinc finger domains containing protein Encodes a U12-type spliceosomal protein U11/U12-31K. Involved in U12 intron splicing via RNA chaperone activity and affects plant development. RNA recognition motif and CCHC-type zinc finger domains containing protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Ribonucleoprotein%2C BRUNO-like (InterPro:IPR015903)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C Zinc finger%2C CCHC-type (InterPro:IPR001878)%3B BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2)%3B Has 867 Blast hits to 867 proteins in 310 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 452%3B Fungi - 160%3B Plants - 158%3B Viruses - 0%3B Other Eukaryotes - 97 (source: NCBI BLink). Chr3 + View
Brassica napus C05p57770 C05 - View
Brassica napus A05p38760 A05 - View
Brassica oleracea BolC5t34434H C5 - View
Brassica rapa BraA05t22667Z A05 - View
Camellia sinensis var. sinensis CSS0003122 PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Vitis vinifera] Chr7 - View
Cannabis sativa CANSAT56G4416 NC_044371.1 + View
Coffea canephora Cc02_g10870 RNA recognition motif and CCHC-type zinc finger domains containing protein chr2 + View
Citrus clementina Ciclev10032576m.g scaffold_4 + View
Cardamine hirsuta CARHR084880 RNA binding protein Chr3 + View
Carya illinoinensis CiPaw.01G268200 K13154 - U11/U12 small nuclear ribonucleoprotein 31 kDa protein (ZCRB1) Chr01 - View
Citrullus lanatus ClCG08G007750 RNA binding motif protein, putative CG_Chr08 + View
Cucumis melo MELO3C019829.2 RNA binding protein chr03 - View
Carica papaya Cpa.g.sc53.138 supercontig_53 + View
Capsella rubella Carub.0003s0958 K13154 - U11/U12 small nuclear ribonucleoprotein 31 kDa protein (ZCRB1) scaffold_3 + View
Cucumis sativus L. CsaV3_2G020860 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 chr2 + View
Davidia involucrata Dinv31238 GWHABJS00000004 + View
Durio zibethinus Duzib106G0439 NW_019168492.1 + View
Erigeron canadensis ECA233G1775 Conyza_canadensis_scaffold:1 - View
Erythranthe guttata Migut.F01703 scaffold_6 - View
Eutrema salsugineum Thhalv10021363m.g K13154 - U11/U12 small nuclear ribonucleoprotein 31 kDa protein (ZCRB1) scaffold_13 - View
Fragaria x ananassa FAN03G0143 PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) Fvb7-3 + View
Fragaria x ananassa FAN01G1901 K13154 - U11/U12 small nuclear ribonucleoprotein 31 kDa protein (ZCRB1) Fvb7-4 + View
Fragaria x ananassa FAN10G2046 PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) Fvb7-1 - View
Fragaria vesca FvH4_7g18730 K13154 - U11/U12 small nuclear ribonucleoprotein 31 kDa protein (ZCRB1) Fvb7 - View
Gossypium hirsutum Gohir.A05G293201 K13154 - U11/U12 small nuclear ribonucleoprotein 31 kDa protein (ZCRB1) A05 + View
Lonicera japonica Lj2C21T5 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_8_20881 K13154 - U11/U12 small nuclear ribonucleoprotein 31 kDa protein (ZCRB1) Lsat_1_v8_lg_8 + View
Malus domestica MD01G1102800 RNA recognition motif and CCHC-type zinc finger domains containing protein Chr01 - View
Manihot esculenta Manes.07G133144 Chromosome07 - View
Nelumbo nucifera Nn2g13815 chr2 - View
Nicotiana tabacum Nitab4.5_0001450g0130 Zinc finger, CCHC-type, RNA recognition motif domain, Nucleotide-binding, alpha-beta plait, RNA recognition motif domain, eukaryote Nitab4.5_0001450 - View
Petunia axillaris Peaxi162Scf00145g00117 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 Peaxi162Scf00145 + View
Punica granatum PGR142G1789 NC_045128.1 - View
Prunus persica Prupe.2G208400 K13154 - U11/U12 small nuclear ribonucleoprotein 31 kDa protein (ZCRB1) Pp02 - View
Papaver somniferum PSO339G0916 NC_039366.1 - View
Papaver somniferum PSO801G0341 NW_020628818.1 + View
Populus trichocarpa Potri.010G227500 K13154 - U11/U12 small nuclear ribonucleoprotein 31 kDa protein (ZCRB1) Chr10 + View
Quercus lobata QL08p054194 8 - View
Rosa chinensis RcHm_v2.0_Chr1g0362501 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim09G0147300 chr09 + View
Salix brachista Sabra10G0175500 GWHAAZH00000010 + View
Simmondsia chinensis Sc09g0006040 GWHAASQ00000009 + View
Sechium edule Sed0023186 LG01 - View
Solanum lycopersicum Solyc11g008290.1 RNA binding protein (AHRD V3.3 *** B6U3T0_MAIZE) SL4.0ch11 + View
Schrenkiella parvula Sp3g08670 K13154 - U11/U12 small nuclear ribonucleoprotein 31 kDa protein (ZCRB1) ch3-1 + View
Solanum tuberosum PGSC0003DMG400031069 RNA binding protein ST4.03ch11 - View
Trochodendron aralioides TAR633G2602 group2 + View
Theobroma cacao Thecc.10G084800 RNA recognition motif and CCHC-type zinc finger domains containing protein Chromosome_10 + View
Tarenaya hassleriana THA.LOC104816427 U11/U12 small nuclear ribonucleoprotein 31 kDa protein NW_010965775.1 + View
Tripterygium wilfordii TWI63G1477 NC_052240.1 + View
Utricularia gibba unitig_899.g15040 unitig_899 - View
Vaccinium macrocarpon vmacro04833 Similar to SNRNP31: U11/U12 small nuclear ribonucleoprotein 31 kDa protein (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01016177001 chr13 + View