Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G7770 LG-5 + View
Acer truncatum Atru.chr3.3638 chr3 - View
Actinidia chinensis Actinidia07131 Lachesis_group13 + View
Actinidia chinensis Actinidia24095 Lachesis_group24 + View
Amaranthus hybridus Ah.01g002830 Zinc finger CCCH domain-containing protein 24 (AtC3H24) (EC 2.1.1.-) AmaHy_arrow1_Scaffold_1 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I533MD 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7B6ACI 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT2G28450 zinc finger (CCCH-type) family protein zinc finger (CCCH-type) family protein%3B FUNCTIONS IN: zinc ion binding%2C RNA methyltransferase activity%2C nucleic acid binding%3B INVOLVED IN: acetate biosynthetic process from carbon monoxide%2C methanol oxidation%2C RNA processing%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%2C (Uracil-5)-methyltransferase (InterPro:IPR010280)%3B BEST Arabidopsis thaliana protein match is: RNA methyltransferase family protein (TAIR:AT3G21300.1)%3B Has 8231 Blast hits to 7095 proteins in 1964 species: Archae - 111%3B Bacteria - 7000%3B Metazoa - 343%3B Fungi - 116%3B Plants - 121%3B Viruses - 4%3B Other Eukaryotes - 536 (source: NCBI BLink). zinc finger (CCCH-type) family protein%3B FUNCTIONS IN: zinc ion binding%2C RNA methyltransferase activity%2C nucleic acid binding%3B INVOLVED IN: RNA processing%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%2C (Uracil-5)-methyltransferase (InterPro:IPR010280)%3B BEST Arabidopsis thaliana protein match is: RNA methyltransferase family protein (TAIR:AT3G21300.1). Chr2 - View
Amborella trichopoda ATR0115G037 AmTr_v1.0_scaffold00175 + View
Brassica napus C04p22930 C04 + View
Brassica napus A07p19020 A07 - View
Brassica oleracea BolC4t23787H C4 + View
Beta vulgaris EL10Ac9g22502 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0041314 PREDICTED: zinc finger CCCH domain-containing protein 24 isoform X2 [Vitis vinifera] Chr11 - View
Capsicum annuum CAN.G631.20 PGAv.1.6.scaffold631 + View
Cannabis sativa CANSAT54G1801 NC_044375.1 + View
Cicer arietinum L. Ca_05253_v3 Ca_LG2_v3 + View
Corylus avellana Haze_23841 Similar to At2g28450: Zinc finger CCCH domain-containing protein 24 (Arabidopsis thaliana OX%3D3702) 6 - View
Coffea canephora Cc01_g11200 Zinc finger CCCH domain-containing protein 24 chr1 - View
Citrus clementina Ciclev10027798m.g scaffold_8 - View
Carya illinoinensis CiPaw.14G080100 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Chr14 + View
Citrullus lanatus ClCG02G021120 tRNA uracil-5-methyltransferase A-like protein CG_Chr02 + View
Cucumis melo MELO3C025769.2 zinc finger CCCH domain-containing protein 24 chr11 + View
Chenopodium quinoa AUR62024992 At2g28450: Zinc finger CCCH domain-containing protein 24 C_Quinoa_Scaffold_4082 - View
Chenopodium quinoa AUR62039627 At2g28450: Zinc finger CCCH domain-containing protein 24 C_Quinoa_Scaffold_3093 + View
Cucumis sativus L. CsaV3_6G013880 zinc finger CCCH domain-containing protein 24 chr6 + View
Daucus carota DCAR_018815 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv32755 GWHABJS00000010 - View
Durio zibethinus Duzib168G0972 NW_019168159.1 - View
Erigeron canadensis ECA233G6150 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.J00934 Chr10 - View
Erythranthe guttata Migut.D02217 scaffold_4 + View
Eutrema salsugineum Thhalv10016347m.g 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase scaffold_10 - View
Fragaria x ananassa FAN21G0488 K15332 - tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-] (TRMT2A) Fvb3-2 - View
Fragaria x ananassa FAN16G3073 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Fvb3-3 - View
Fragaria x ananassa FAN11G2629 K15332 - tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-] (TRMT2A) Fvb3-4 + View
Fragaria x ananassa FAN25G3738 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Fvb3-1 + View
Fragaria vesca FvH4_3g32530 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Fvb3 - View
Gossypium hirsutum Gohir.D03G133900 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase D03 + View
Glycine max Glyma.11G147200 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Gm11 - View
Glycine max Glyma.12G068100 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Gm12 - View
Helianthus annuus HanXRQChr13g0403491 Probable zinc finger (CCCH-type) family protein HanXRQChr13 + View
Hydrangea macrophylla Hma1.2p1_1031F.1_g249980 Hma1.2p1_1031F.1 + View
Lupinus albus Lalb_Chr01g0004271 K15332 - tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-] (TRMT2A) Lalb_Chr01 + View
Lupinus albus Lalb_Chr19g0137331 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Lalb_Chr19 - View
Lotus japonicus Lj3g0020359 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase chr3 + View
Lonicera japonica Lj2A1029T35 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_6_46081 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Lsat_1_v8_lg_6 - View
Magnolia biondii MBI10_g13354_MAGBIO AED:0.28 Chr10 - View
Malus domestica MD11G1134700 zinc finger (CCCH-type) family protein Chr11 + View
Malus domestica MD03G1116700 zinc finger (CCCH-type) family protein Chr03 + View
Manihot esculenta Manes.04G021900 Chromosome04 - View
Nelumbo nucifera Nn2g10776 chr2 + View
Nicotiana tabacum Nitab4.5_0003701g0010 Methyltransferase domain, Zinc finger, CCCH-type, RNA recognition motif domain, Nucleotide-binding, alpha-beta plait, (Uracil-5)-methyltransferase Nitab4.5_0003701 - View
Nicotiana tabacum Nitab4.5_0000650g0150 RNA recognition motif domain, Zinc finger, CCCH-type, Nucleotide-binding, alpha-beta plait, Methyltransferase domain, (Uracil-5)-methyltransferase Nitab4.5_0000650 + View
Olea europaea Oeu002862.1 chr11 + View
Petunia axillaris Peaxi162Scf00270g00915 zinc finger (CCCH-type) family protein Peaxi162Scf00270 - View
Punica granatum PGR119G0002 NC_045132.1 - View
Prunus persica Prupe.6G100600 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Pp06 + View
Pisum sativum Psat7g224200 Methyltransferase domain chr7LG7 + View
Papaver somniferum PSO063G6738 NC_039364.1 + View
Papaver somniferum PSO339G1100 NC_039366.1 - View
Populus trichocarpa Potri.009G013000 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Chr09 + View
Phaseolus vulgaris Phvul.011G078600 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Chr11 + View
Quercus lobata QL01p022359 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0059591 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0093900 chr13 + View
Striga asiatica SGA_v2.0_scaffold97G29223 scaffold97 + View
Salvia bowleyana SalBow3G2811 GWHASIU00000006 + View
Salix brachista Sabra09G0008300 GWHAAZH00000009 - View
Sechium edule Sed0021600 LG05 - View
Schrenkiella parvula Sp4g11270 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase ch4-6 - View
Solanum pennellii Sopen11g028060 zinc finger (CCCH-type) family protein | FUNCTIONS IN: zinc ion binding, RNA methyltransferase activity, nucleic acid binding | INVOLVED IN: RNA processing | LOCATED IN: cellular_component unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , (Uracil-5)-methyltransferase | BEST Arabidopsis thaliana protein match is: RNA methyltransferase family protein . Spenn-ch11 + View
Trochodendron aralioides TAR633G0045 group2 - View
Theobroma cacao Thecc.09G339700 Zinc finger family protein Chromosome_9 + View
Tarenaya hassleriana THA.LOC104800610 zinc finger CCCH domain-containing protein 24 NW_010969548.1 - View
Trifolium pratense TPR.G15543 Tp57577_TGAC_v2_LG4 - View
Tripterygium wilfordii TWI79G1139 NC_052238.1 + View
Utricularia gibba unitig_899.g14913 unitig_899 + View
Vaccinium macrocarpon vmacro03193 Similar to At2g28450: Zinc finger CCCH domain-containing protein 24 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1127G2043 CM024076.1 + View
Vitis vinifera GSVIVG01025178001 chr6 - View