Gene: Potri.009G013000
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.009G013000
- Transcript Identifier Potri.009G013000.1
- Gene Type Coding gene
- Location Chr09 : 2312599-2320871 : positive
Gene Family Information
- ID HOM05D005381
- #Genes/#Species 141/95
- Phylogenetic origin
- ID ORTHO05D006674
- #Genes/#Species 139/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Potri.009G013000.v4.1
- pacid 42772024
Descriptions
- Description 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | IEA | InterPro | RNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0008173 | IEA | InterPro | RNA methyltransferase activity | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT2G28450 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR036855 | Zinc finger, CCCH-type superfamily |
| IPR000571 | Zinc finger, CCCH-type |
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR025714 | Methyltransferase domain |
| IPR010280 | (Uracil-5)-methyltransferase family |
| IPR000504 | RNA recognition motif domain |