Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc06g053850.4 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QTR8_9MAGN) SL4.0ch06 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G17200 LG-10 + View
Aethionema arabicum Aa31LG5G3480 LG-5 + View
Acer truncatum Atru.chr4.2327 chr4 - View
Acer truncatum Atru.chr5.1526 chr5 + View
Actinidia chinensis Actinidia19963 Lachesis_group19 - View
Arabidopsis lyrata AL8G16380 scaffold_8 + View
Arabidopsis lyrata AL5G46220 scaffold_5 + View
Amaranthus hybridus Ah.11g050200 Pentatricopeptide repeat-containing protein At3g63370, chloroplastic (Protein ORGANELLE TRANSCRIPT PROCESSING 86) AmaHy_arrow1_Scaffold_11 - View
Aquilegia oxysepala Aqoxy2G03466 CHR02 + View
Arabidopsis thaliana AT5G43790 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G37380.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G63370 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. ORGANELLE TRANSCRIPT PROCESSING 86 (OTP86)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1)%3B Has 48148 Blast hits to 13528 proteins in 241 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 44%3B Fungi - 62%3B Plants - 47536%3B Viruses - 0%3B Other Eukaryotes - 502 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0665G144 AmTr_v1.0_scaffold00002 + View
Brassica napus C04p29900 C04 - View
Beta vulgaris EL10Ac4g09133 PF14432 - DYW family of nucleic acid deaminases (DYW_deaminase) Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0016565 PREDICTED: pentatricopeptide repeat-containing protein At3g63370 isoform X1 [Vitis vinifera] Chr11 - View
Camellia sinensis var. sinensis CSS0036778 PREDICTED: pentatricopeptide repeat-containing protein At5g43790 [Vitis vinifera] Chr9 + View
Cicer arietinum L. Ca_09725_v3 Ca_LG4_v3 - View
Coffea canephora Cc01_g18980 Pentatricopeptide repeat-containing protein At3g63370 chr1 - View
Citrus clementina Ciclev10024388m.g scaffold_3 - View
Cardamine hirsuta CARHR179690 Pentatricopeptide repeat-containing protein Chr6 + View
Cardamine hirsuta CARHR291600 Pentatricopeptide repeat-containing protein NSCAFB.271 - View
Carya illinoinensis CiPaw.02G119600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr02 - View
Carya illinoinensis CiPaw.11G071900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr11 - View
Carya illinoinensis CiPaw.08G109800 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr08 + View
Carica papaya Cpa.g.sc52.123 supercontig_52 + View
Chenopodium quinoa AUR62011969 PCMP-H83: Pentatricopeptide repeat-containing protein At3g63370, chloroplastic C_Quinoa_Scaffold_2008 - View
Chenopodium quinoa AUR62032281 PCMP-H83: Pentatricopeptide repeat-containing protein At3g63370, chloroplastic C_Quinoa_Scaffold_1762 - View
Capsella rubella Carub.0008s0485 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) scaffold_8 + View
Daucus carota DCAR_002699 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_030711 hypothetical protein DCARv2_Chr9 + View
Davidia involucrata Dinv22499 GWHABJS00000007 + View
Durio zibethinus Duzib138G1818 NW_019167893.1 + View
Erigeron canadensis ECA248G1254 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.H03410 Chr08 - View
Eucalyptus grandis Eucgr.K03322 Chr11 - View
Erythranthe guttata Migut.D00354 scaffold_4 - View
Erythranthe guttata Migut.G00411 scaffold_7 - View
Eutrema salsugineum Thhalv10003201m.g PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) scaffold_17 + View
Fragaria x ananassa FAN27G2871 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-1 + View
Fragaria x ananassa FAN15G0130 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-4 - View
Fragaria x ananassa FAN24G2087 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-2 + View
Fragaria x ananassa FAN20G1983 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-3 - View
Fragaria x ananassa FAN14G2312 Fvb6-1 + View
Fragaria vesca FvH4_2g22910 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2 - View
Gossypium hirsutum Gohir.A09G219901 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A09 + View
Gossypium hirsutum Gohir.D09G222100 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D09 + View
Gossypium hirsutum Gohir.A08G063800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A08 - View
Gossypium hirsutum Gohir.D08G072300 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D08 - View
Glycine max Glyma.10G030200 Gm10 + View
Glycine max Glyma.02G144100 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm02 - View
Gossypium raimondii Gorai.006G243300 Chr06 + View
Helianthus annuus HanXRQChr06g0177851 Probable pentatricopeptide repeat-containing protein At3g63370, chloroplastic HanXRQChr06 + View
Hydrangea macrophylla Hma1.2p1_0172F.1_g076040 Hma1.2p1_0172F.1 + View
Lotus japonicus Lj6g0010510 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr6 - View
Lotus japonicus Lj5g0004359 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr5 - View
Lonicera japonica Lj2P1164T18 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_5_185321 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lsat_1_v8_lg_5 - View
Magnolia biondii MBI11_g15909_MAGBIO AED:0.03 Chr11 - View
Malus domestica MD11G1278400 Tetratricopeptide repeat (TPR)-like superfamily protein Chr11 - View
Manihot esculenta Manes.01G203700 Chromosome01 - View
Medicago truncatula Medtr1g071240 pentatricopeptide (PPR) repeat protein chr1 - View
Medicago truncatula Medtr1g041310 pentatricopeptide (PPR) repeat protein chr1 - View
Nelumbo nucifera Nn1g02535 chr1 - View
Nelumbo nucifera Nn1g02465 chr1 + View
Nelumbo nucifera Nn3g19496 chr3 - View
Olea europaea Oeu018415.1 chr16 + View
Olea europaea Oeu025766.1 chr16 + View
Oryza sativa ssp. japonica Os03g0795200 Pentatricopeptide repeat domain containing protein. chr03 + View
Petunia axillaris Peaxi162Scf00129g00001 Pentatricopeptide repeat-containing protein Peaxi162Scf00129 + View
Petunia axillaris Peaxi162Scf00259g00045 Pentatricopeptide repeat-containing protein Peaxi162Scf00259 - View
Punica granatum PGR004G1397 NC_045131.1 + View
Punica granatum PGR044G0810 NC_045134.1 - View
Prunus persica Prupe.8G234400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp08 - View
Pisum sativum Psat6g058800 DYW family of nucleic acid deaminases chr6LG2 - View
Pisum sativum Psat6g103280 PPR repeat family chr6LG2 - View
Populus trichocarpa Potri.005G215500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr05 + View
Phaseolus vulgaris Phvul.007G188900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr07 + View
Quercus lobata QL03p025831 3 - View
Quercus lobata QL12p042349 12 + View
Rosa chinensis RcHm_v2.0_Chr6g0289871 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim13G0028900 chr13 + View
Striga asiatica SGA_v2.0_scaffold81G26070 scaffold81 + View
Salvia bowleyana SalBow4G0448 GWHASIU00000008 - View
Salix brachista Sabra02G0038800 GWHAAZH00000002 - View
Salix brachista Sabra05G0164700 GWHAAZH00000005 + View
Simmondsia chinensis Sc19g0003720 GWHAASQ00000019 + View
Simmondsia chinensis Sc13g0004810 GWHAASQ00000013 + View
Simmondsia chinensis Sc05g0001330 GWHAASQ00000005 + View
Schrenkiella parvula Sp5g00180 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch5-1 - View
Schrenkiella parvula Sp2g08600 PF01535 - PPR repeat (PPR) ch2-4 - View
Solanum pennellii Sopen03g003310 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein Spenn-ch03 + View
Solanum pennellii Sopen09g027460 Encodes a chloroplast RNA editing factor. | ORGANELLE TRANSCRIPT PROCESSING 86 (OTP86) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch09 + View
Solanum pennellii Sopen06g018980 Tetratricopeptide repeat (TPR)-like superfamily protein | LOCATED IN: mitochondrion | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400019340 Pentatricopeptide repeat-containing protein ST4.03ch09 + View
Trochodendron aralioides TAR362G1136 group17 - View
Trochodendron aralioides TAR633G2070 group2 - View
Trochodendron aralioides TAR365G0181 group16 - View
Theobroma cacao Thecc.01G271100 Tetratricopeptide repeat-like superfamily protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104817568 pentatricopeptide repeat-containing protein At3g63370%2C chloroplastic NW_010965946.1 + View
Tripterygium wilfordii TWI12G0148 NC_052243.1 + View
Utricularia gibba unitig_32.g10828 unitig_32 + View
Vaccinium macrocarpon vmacro08377 Similar to PCMP-E105: Pentatricopeptide repeat-containing protein At5g08305 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02614 Similar to PCMP-H83: Pentatricopeptide repeat-containing protein At3g63370, chloroplastic (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Zea mays Zm00001eb051000 Zm00001e005067 Pentatricopeptide repeat-containing protein chloroplastic 1 + View