Gene: AT3G63370

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G63370
  • Transcript Identifier AT3G63370.2
  • Gene Type Coding gene
  • Location Chr3 : 23402080-23405180 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G63370.2
  • symbol OTP86
  • full_name ORGANELLE TRANSCRIPT PROCESSING 86
  • uniprot Q9M1V3

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description ORGANELLE TRANSCRIPT PROCESSING 86 (OTP86); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1); Has 48148 Blast hits to 13528 proteins in 241 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 62; Plants - 47536; Viruses - 0; Other Eukaryotes - 502 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031425
IMP
Gene Ontologychloroplast RNA processing1
GO:0009451
IBA
Gene OntologyRNA modification2
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003729
IDA
Gene OntologymRNA binding3
GO:0003723
IBA
Gene OntologyRNA binding2
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
Gene Ontologychloroplast1
GO:0043231
IBA
Gene Ontologyintracellular membrane-bounded organelle2
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR032867 DYW domain
Mapman id Description
16.11.3.3.4.51 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (OTP86)