Gene: Sopen09g027460
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g027460
- Transcript Identifier Sopen09g027460.1
- Gene Type Coding gene
- Location Spenn-ch09 : 75299826-75302615 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D000003
- #Genes/#Species 15137/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen09g027460.1
Descriptions
- Description Encodes a chloroplast RNA editing factor. | ORGANELLE TRANSCRIPT PROCESSING 86 (OTP86) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031425 | ISO | PLAZA Integrative Orthology | chloroplast RNA processing | AT3G63370 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G63370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G63370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.11.3.3.4.51 | RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (OTP86) |