Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc08g078300.4 Homeobox-leucine zipper protein HAT4 (AHRD V3.3 *** A0A2G2XL32_CAPBA) SL4.0ch08 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G12960 LG-2 + View
Aethionema arabicum Aa31LG6G200 LG-6 + View
Acer truncatum Atru.chr9.1261 chr9 - View
Actinidia chinensis Actinidia10845 Lachesis_group14 - View
Actinidia chinensis Actinidia02162 Lachesis_group23 + View
Arabidopsis lyrata AL7G37880 scaffold_7 - View
Arabidopsis lyrata AL7G37200 scaffold_7 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.L2HUY0 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WNIN40 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT4G16780 homeobox protein 2 Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin. homeobox protein 2 (HB-2)%3B CONTAINS InterPro DOMAIN/s: HD-ZIP protein%2C N-terminal (InterPro:IPR006712)%2C Helix-turn-helix motif%2C lambda-like repressor (InterPro:IPR000047)%2C Homeobox (InterPro:IPR001356)%2C Homeobox%2C conserved site (InterPro:IPR017970)%2C Homeodomain-like (InterPro:IPR009057)%2C Leucine zipper%2C homeobox-associated (InterPro:IPR003106)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1)%3B Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4716%3B Fungi - 327%3B Plants - 2046%3B Viruses - 18%3B Other Eukaryotes - 123 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G47370 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein homeobox-leucine zipper genes induced by auxin%2C but not by other phytohormones. Plays opposite roles in the shoot and root tissues in regulating auxin-mediated morphogenesis. HAT2%3B FUNCTIONS IN: transcription repressor activity%2C DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: response to auxin stimulus%2C auxin mediated signaling pathway%2C shade avoidance%2C regulation of transcription%2C DNA-dependent%2C unidimensional cell growth%3B LOCATED IN: nucleus%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: HD-ZIP protein%2C N-terminal (InterPro:IPR006712)%2C Homeobox%2C conserved site (InterPro:IPR017970)%2C Homeobox (InterPro:IPR001356)%2C Homeodomain-like (InterPro:IPR009057)%2C Leucine zipper%2C homeobox-associated (InterPro:IPR003106)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT4G17460 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein Encodes a class II HD-ZIP protein that regulates meristematic activity in different tissues%2C and that it is necessary for the correct formation of the gynoecium. HAT1%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%2C transcription%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: HD-ZIP protein%2C N-terminal (InterPro:IPR006712)%2C Helix-turn-helix motif%2C lambda-like repressor (InterPro:IPR000047)%2C Homeobox (InterPro:IPR001356)%2C Homeobox%2C conserved site (InterPro:IPR017970)%2C Homeodomain-like (InterPro:IPR009057)%2C Leucine zipper%2C homeobox-associated (InterPro:IPR003106)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1)%3B Has 7491 Blast hits to 7459 proteins in 526 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 5185%3B Fungi - 268%3B Plants - 1911%3B Viruses - 4%3B Other Eukaryotes - 123 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaNung00150 Contig74 - View
Brassica carinata BcaC06g33567 ChrC06 - View
Brassica carinata BcaNung00091 Contig74 - View
Brassica carinata BcaC09g50417 ChrC09 + View
Brassica napus C07p48780 C07 + View
Brassica napus C01p25670 C01 - View
Brassica napus A09p23000 A09 - View
Brassica napus A03p50450 A03 + View
Brassica napus A01p20430 A01 - View
Brassica napus C02p48620 C02 - View
Brassica oleracea BolC1t02521H C1 - View
Brassica oleracea BolC7t45386H C7 + View
Brassica rapa BraA01t01972Z A01 - View
Brassica rapa BraA09t37904Z A09 - View
Brassica rapa BraA03t14135Z A03 + View
Camellia sinensis var. sinensis CSS0045404 PREDICTED: homeobox-leucine zipper protein HAT4 [Vitis vinifera] Chr14 + View
Capsicum annuum CAN.G62.17 PGAv.1.6.scaffold62 + View
Cicer arietinum L. Ca_21992_v3 Ca_LG7_v3 + View
Coffea canephora Cc08_g12040 Homeobox-leucine zipper protein HAT4 chr8 - View
Citrus clementina Ciclev10021374m.g scaffold_3 - View
Ceratophyllum demersum CDE12G0378 10 + View
Ceratophyllum demersum CDE11G0361 9 - View
Ceratophyllum demersum CDE04G0015 2 - View
Carpinus fangiana Cfa012697 Cfa05 + View
Cardamine hirsuta CARHR223400 Homeobox-leucine zipper protein Chr7 + View
Cardamine hirsuta CARHR140150 homeobox-leucine zipper protein 4 Chr4 - View
Carya illinoinensis CiPaw.13G028000 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) Chr13 - View
Carya illinoinensis CiPaw.12G049500 PF04618 - HD-ZIP protein N terminus (HD-ZIP_N) Chr12 - View
Citrullus lanatus ClCG10G002510 Homeobox-leucine zipper family protein CG_Chr10 - View
Cucumis melo MELO3C013923.2 homeobox-leucine zipper protein HAT4 chr06 - View
Carica papaya Cpa.g.sc89.64 supercontig_89 - View
Chenopodium quinoa AUR62007123 HAT2: Homeobox-leucine zipper protein HAT2 C_Quinoa_Scaffold_1971 - View
Capsella rubella Carub.0007s2458 PTHR24326//PTHR24326:SF140 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED scaffold_7 - View
Capsella rubella Carub.0007s2397 PTHR24326//PTHR24326:SF140 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_3G002500 homeobox-leucine zipper protein HAT4 chr3 - View
Daucus carota DCAR_027755 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_006848 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv21669 GWHABJS00000017 + View
Davidia involucrata Dinv39177 GWHABJS00000003 + View
Durio zibethinus Duzib138G0517 NW_019167893.1 - View
Durio zibethinus Duzib205G0243 NW_019168381.1 - View
Durio zibethinus Duzib084G1196 NW_019167827.1 - View
Durio zibethinus Duzib068G0361 NW_019167838.1 - View
Erigeron canadensis ECA240G3387 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.E00400 Chr05 - View
Eucalyptus grandis Eucgr.D02105 Chr04 + View
Eutrema salsugineum Thhalv10025903m.g PTHR24326:SF140 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10025921m.g PTHR24326:SF140 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED scaffold_1 - View
Gossypium hirsutum Gohir.A12G215000 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) A12 - View
Gossypium hirsutum Gohir.A08G167600 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) A08 - View
Gossypium hirsutum Gohir.A11G027500 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) A11 + View
Gossypium hirsutum Gohir.D11G026700 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) D11 + View
Gossypium hirsutum Gohir.D08G186400 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) D08 - View
Gossypium hirsutum Gohir.D12G217600 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) D12 - View
Glycine max Glyma.11G035900 PTHR24326//PTHR24326:SF140 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED Gm11 - View
Glycine max Glyma.17G144700 PTHR24326//PTHR24326:SF140 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED Gm17 + View
Glycine max Glyma.01G207300 PTHR24326//PTHR24326:SF140 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED Gm01 + View
Glycine max Glyma.05G062700 PTHR24326//PTHR24326:SF140 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED Gm05 + View
Gossypium raimondii Gorai.004G195900 Chr04 - View
Gossypium raimondii Gorai.007G029200 Chr07 + View
Gossypium raimondii Gorai.008G233200 Chr08 - View
Gossypium raimondii Gorai.007G086600 Chr07 - View
Lupinus albus Lalb_Chr16g0379461 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) Lalb_Chr16 - View
Lupinus albus Lalb_Chr09g0324291 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) Lalb_Chr09 - View
Lotus japonicus Lj2g0015204 PF04618 - HD-ZIP protein N terminus (HD-ZIP_N) chr2 + View
Lotus japonicus Lj4g0003446 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) chr4 + View
Lonicera japonica Lj8A270T22 GWHAAZE00000008 + View
Lonicera japonica Lj2A225T46 GWHAAZE00000002 + View
Malus domestica MD04G1061200 homeobox protein 2 Chr04 + View
Manihot esculenta Manes.05G052900 Chromosome05 + View
Manihot esculenta Manes.02G041800 Chromosome02 + View
Medicago truncatula Medtr5g013010 homeobox associated leucine zipper protein chr5 + View
Medicago truncatula Medtr4g100550 homeobox associated leucine zipper protein chr4 - View
Nicotiana tabacum Nitab4.5_0000618g0160 Leucine zipper, homeobox-associated, HD-ZIP protein, N-terminal Nitab4.5_0000618 - View
Oryza sativa ssp. japonica Os10g0561800 Class II homeodomain-leucine zipper (HD-ZIP II) protein, HD-ZIP transcription factor, Regulation of tiller angle and shoot gravitropism, Regulation of the local distribution of auxin chr10 + View
Oryza sativa ssp. japonica Os04g0548700 Homeodomain-like containing protein. chr04 - View
Petunia axillaris Peaxi162Scf00102g00931 homeobox-leucine zipper protein 4 Peaxi162Scf00102 - View
Petunia axillaris Peaxi162Scf00190g01523 homeobox-leucine zipper protein 3 Peaxi162Scf00190 - View
Punica granatum PGR031G3353 NC_045127.1 - View
Punica granatum PGR042G3804 NC_045130.1 - View
Prunus persica Prupe.5G064300 PTHR24326:SF140 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED Pp05 - View
Pisum sativum Psat2g177440 HD-ZIP protein N terminus chr2LG1 - View
Populus trichocarpa Potri.002G136400 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) Chr02 + View
Populus trichocarpa Potri.001G155100 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) Chr01 - View
Phaseolus vulgaris Phvul.003G223200 PTHR24326:SF140 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED Chr03 + View
Quercus lobata QL12p011163 12 - View
Rhododendron simsii Rhsim07G0034700 chr07 + View
Rhododendron simsii Rhsim07G0115400 chr07 + View
Salix brachista Sabra03G0049700 GWHAAZH00000003 + View
Salix brachista Sabra01G0124700 GWHAAZH00000001 - View
Simmondsia chinensis Sc01g0008240 GWHAASQ00000001 - View
Schrenkiella parvula Sp7g16730 PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N) ch7-4 - View
Schrenkiella parvula Sp7g17330 PF04618 - HD-ZIP protein N terminus (HD-ZIP_N) ch7-4 - View
Solanum pennellii Sopen06g020980 homeobox-leucine zipper genes induced by auxin, but not by other phytohormones. Plays opposite roles in the shoot and root tissues in regulating auxin-mediated morphogenesis. | HAT2 | FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: response to auxin stimulus, auxin mediated signaling pathway, shade avoidance, regulation of transcription, DNA-dependent, unidimensional cell growth | LOCATED IN: nucleus | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal , Homeobox, conserved site , Homeobox , Homeodomain-like , Leucine zipper, homeobox-associated , Homeodomain-related | BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400026264 Homeobox-leucine zipper protein ST4.03ch08 - View
Solanum tuberosum PGSC0003DMG402012500 Homeobox-leucine zipper protein ST4.03ch08 + View
Solanum tuberosum PGSC0003DMG400024157 Homeobox-leucine zipper protein ST4.03ch06 - View
Selenicereus undatus Hund14523 Scaffold_33677 + View
Trochodendron aralioides TAR629G2078 group0 - View
Theobroma cacao Thecc.03G246900 Homeobox-leucine zipper protein 4 / HD-ZIP protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104802489 homeobox-leucine zipper protein HAT3-like NW_010970490.1 + View
Tarenaya hassleriana THA.LOC104812769 homeobox-leucine zipper protein HAT4-like NW_010965372.1 - View
Tripterygium wilfordii TWI81G0927 NC_052251.1 - View
Tripterygium wilfordii TWI60G1534 NC_052246.1 - View
Vaccinium macrocarpon vmacro00013 Similar to HAT2: Homeobox-leucine zipper protein HAT2 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro13484 Similar to HAT4: Homeobox-leucine zipper protein HAT4 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G2625 CM024069.1 + View