Gene: Sopen06g020980

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g020980
  • Transcript Identifier Sopen06g020980.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 48705311-48706801 : negative

Gene Family Information

  • ID HOM05D000393
  • #Genes/#Species 1261/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g020980.1

Descriptions

  • Description homeobox-leucine zipper genes induced by auxin, but not by other phytohormones. Plays opposite roles in the shoot and root tissues in regulating auxin-mediated morphogenesis. | HAT2 | FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: response to auxin stimulus, auxin mediated signaling pathway, shade avoidance, regulation of transcription, DNA-dependent, unidimensional cell growth | LOCATED IN: nucleus | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal , Homeobox, conserved site , Homeobox , Homeodomain-like , Leucine zipper, homeobox-associated , Homeodomain-related | BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003106 Leucine zipper, homeobox-associated
IPR000047 Helix-turn-helix motif
IPR001356 Homeobox domain
IPR006712 HD-ZIP protein, N-terminal
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)