Gene: Carub.0007s2397

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0007s2397
  • Transcript Identifier Carub.0007s2397.1
  • Gene Type Coding gene
  • Location scaffold_7 : 9082024-9083146 : negative

Gene Family Information

  • ID HOM05D000393
  • #Genes/#Species 1261/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0007s2397.v1.1
  • pacid 39233338
  • synonym Carubv10005434m.g

Descriptions

  • Description PTHR24326//PTHR24326:SF140 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0003006
ISO
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT4G17460
GO:0010582
ISO
PLAZA Integrative Orthologyfloral meristem determinacy AT4G17460
GO:0048467
ISO
PLAZA Integrative Orthologygynoecium development AT4G17460
GO:0080127
ISO
PLAZA Integrative Orthologyfruit septum development AT4G17460
GO:0048507
ISO
PLAZA Integrative Orthologymeristem development AT4G17460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G17460
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G17460
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT4G17460

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR001356 Homeobox domain
IPR006712 HD-ZIP protein, N-terminal
IPR003106 Leucine zipper, homeobox-associated
IPR000047 Helix-turn-helix motif
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)