Gene: AT4G17460

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G17460
  • Transcript Identifier AT4G17460.1
  • Gene Type Coding gene
  • Location Chr4 : 9739862-9740983 : positive

Gene Family Information

  • ID HOM05D000393
  • #Genes/#Species 1261/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G17460.1
  • symbol HAT1
  • uniprot P46600

Descriptions

  • Description Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein
  • Computational description HAT1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7491 Blast hits to 7459 proteins in 526 species: Archae - 0; Bacteria - 0; Metazoa - 5185; Fungi - 268; Plants - 1911; Viruses - 4; Other Eukaryotes - 123 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080127
IGI
Gene Ontologyfruit septum development1
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0048507
IGI
Gene Ontologymeristem development1
GO:0048467
IGI
Gene Ontologygynoecium development1
GO:0010582
IGI
Gene Ontologyfloral meristem determinacy1
GO:0003006
IGI
Gene Ontologydevelopmental process involved in reproduction1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding2
GO:0000981
IEA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0043621
IPI
Gene Ontologyprotein self-association1
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus1
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR001356 Homeobox domain
IPR006712 HD-ZIP protein, N-terminal
IPR003106 Leucine zipper, homeobox-associated
IPR000047 Helix-turn-helix motif
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)