Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sc14g0008500 GWHAASQ00000014 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G10330 LG-2 - View
Aethionema arabicum Aa31LG4G10820 LG-4 - View
Aethionema arabicum Aa31LG7G7960 LG-7 - View
Aethionema arabicum Aa31LG11G14500 LG-11 + View
Acer truncatum Atru.chr11.1925 chr11 + View
Actinidia chinensis Actinidia08202 Lachesis_group15 - View
Arabidopsis lyrata AL2G29270 scaffold_2 + View
Arabidopsis lyrata AL2G16860 scaffold_2 - View
Avicennia marina MSTRG.7851 ScioBoG_102841_HRSCAF_103114 + View
Avicennia marina MSTRG.13390 ScioBoG_18778_HRSCAF_18863 - View
Amaranthus hybridus Ah.03g132080 AmaHy_arrow1_Scaffold_3 - View
Amaranthus hybridus Ah.02g131710 Paired amphipathic helix protein Sin3-like 3 (Histone deacetylase complex subunit Sin3) (AtSin3) (Transcriptional corepressor Sin3) AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy3G03153 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.URPE6A K11644 - paired amphipathic helix protein Sin3a (SIN3A) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MG25IW K11644 - paired amphipathic helix protein Sin3a (SIN3A) arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IC2T98 K11644 - paired amphipathic helix protein Sin3a (SIN3A) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT1G70030 Paired amphipathic helix (PAH2) superfamily protein Paired amphipathic helix (PAH2) superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Paired amphipathic helix (InterPro:IPR003822)%3B BEST Arabidopsis thaliana protein match is: SIN3-like 4 (TAIR:AT1G70060.1)%3B Has 1404 Blast hits to 650 proteins in 168 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 539%3B Fungi - 520%3B Plants - 290%3B Viruses - 0%3B Other Eukaryotes - 55 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G27220 paired amphipathic helix repeat-containing protein paired amphipathic helix repeat-containing protein%3B FUNCTIONS IN: nucleic acid binding%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: sperm cell%3B CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase%2C ribonuclease H fold (InterPro:IPR012337)%2C Paired amphipathic helix (InterPro:IPR003822)%3B BEST Arabidopsis thaliana protein match is: Paired amphipathic helix (PAH2) superfamily protein (TAIR:AT1G27250.1)%3B Has 833 Blast hits to 732 proteins in 188 species: Archae - 0%3B Bacteria - 52%3B Metazoa - 196%3B Fungi - 169%3B Plants - 372%3B Viruses - 0%3B Other Eukaryotes - 44 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G59890 SIN3-like 5 SIN3-like 5 (SNL5)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194)%2C Paired amphipathic helix (InterPro:IPR003822)%3B BEST Arabidopsis thaliana protein match is: SIN3-like 6 (TAIR:AT1G10450.1)%3B Has 2059 Blast hits to 826 proteins in 195 species: Archae - 0%3B Bacteria - 5%3B Metazoa - 811%3B Fungi - 648%3B Plants - 432%3B Viruses - 0%3B Other Eukaryotes - 163 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC05g25349 ChrC05 + View
Brassica carinata BcaB07g32399 ChrB07 + View
Brassica carinata BcaB03g15528 ChrB03 + View
Brassica carinata BcaC09g49452 ChrC09 - View
Brassica carinata BcaC08g46454 ChrC08 + View
Brassica carinata BcaB03g14781 ChrB03 + View
Brassica carinata BcaC06g31798 ChrC06 + View
Brassica carinata BcaB04g20237 ChrB04 + View
Brassica carinata BcaC06g35081 ChrC06 - View
Brassica carinata BcaC08g45844 ChrC08 - View
Brassica carinata BcaC05g24883 ChrC05 - View
Brassica napus C06p43890 C06 + View
Brassica napus C01p36580 C01 + View
Brassica napus A06p07090 A06 + View
Brassica napus A07p31240 A07 - View
Brassica napus C07p20030 C07 + View
Brassica napus C06p36350 C06 - View
Brassica napus C05p23390 C05 - View
Brassica napus A02p16300 A02 + View
Brassica napus A07p36470 A07 + View
Brassica oleracea BolC9t59052H C9 + View
Brassica oleracea BolC5t31041H C5 - View
Brassica oleracea BolC1t03619H C1 + View
Brassica oleracea BolC9t55134H C9 - View
Brassica oleracea BolC6t39461H C6 + View
Brassica rapa BraA07t30756Z A07 - View
Brassica rapa BraA06t23924Z A06 + View
Brassica rapa BraA07t29112Z A07 + View
Brassica rapa BraA02t06688Z A02 + View
Brassica rapa BraA07t31218Z A07 + View
Brassica rapa BraA09t39561Z A09 + View
Beta vulgaris EL10Ac6g13094 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0037469 PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X2 [Vitis vinifera] Chr12 + View
Capsicum annuum CAN.G206.73 PGAv.1.6.scaffold206 - View
Cicer arietinum L. Ca_04238_v3 Ca_LG2_v3 - View
Cicer arietinum L. Ca_04640_v3 Ca_LG2_v3 - View
Corylus avellana Haze_12115 Similar to SNL4: Paired amphipathic helix protein Sin3-like 4 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc11_g13980 Paired amphipathic helix protein Sin3-like 3 chr11 + View
Coffea canephora Cc07_g02780 Paired amphipathic helix protein Sin3-like 2 chr7 - View
Citrus clementina Ciclev10030507m.g scaffold_4 - View
Carpinus fangiana Cfa009083 Cfa03 + View
Cardamine hirsuta CARHR010590 Paired amphipathic helix protein Sin3-like 6 Chr1 + View
Cardamine hirsuta CARHR063110 Paired amphipathic helix protein Sin3-like 3 Chr2 + View
Cardamine hirsuta CARHR024570 Paired amphipathic helix protein Sin3-like 3 Chr1 - View
Cardamine hirsuta CARHR053200 Paired amphipathic helix protein Sin3-like 5 Chr2 - View
Carya illinoinensis CiPaw.06G077100 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Chr06 - View
Carya illinoinensis CiPaw.11G033700 KOG4204 - Histone deacetylase complex, SIN3 component Chr11 - View
Carya illinoinensis CiPaw.04G021700 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Chr04 + View
Carya illinoinensis CiPaw.05G144300 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Chr05 + View
Citrullus lanatus ClCG05G024900 Paired amphipathic helix protein Sin3 CG_Chr05 + View
Cucumis melo MELO3C012036.2 Paired amphipathic helix SIN3-like protein chr10 + View
Carica papaya Cpa.g.sc5.318 supercontig_5 + View
Chenopodium quinoa AUR62026526 SNL4: Paired amphipathic helix protein Sin3-like 4 C_Quinoa_Scaffold_4244 - View
Capsella rubella Carub.0002s0538 K11644 - paired amphipathic helix protein Sin3a (SIN3A) scaffold_2 - View
Capsella rubella Carub.0002s1671 KOG4204 - Histone deacetylase complex, SIN3 component scaffold_2 + View
Cucumis sativus L. CsaV3_5G032000 Paired amphipathic helix protein Sin3-like chr5 - View
Daucus carota DCAR_026572 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_016517 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_007116 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv35005 GWHABJS00000012 + View
Davidia involucrata Dinv13124 GWHABJS00000006 + View
Davidia involucrata Dinv33684 GWHABJS00000014 - View
Davidia involucrata Dinv31135 GWHABJS00000008 + View
Davidia involucrata Dinv24925 GWHABJS00000018 - View
Durio zibethinus Duzib248G1530 NW_019168048.1 - View
Durio zibethinus Duzib264G1131 NW_019167960.1 - View
Durio zibethinus Duzib268G1764 NW_019168270.1 + View
Erigeron canadensis ECA238G1737 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA246G4457 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA246G0126 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.B03381 Chr02 + View
Erythranthe guttata Migut.E00130 scaffold_5 + View
Erythranthe guttata Migut.L01376 scaffold_12 + View
Eutrema salsugineum Thhalv10023225m.g K11644 - paired amphipathic helix protein Sin3a (SIN3A) scaffold_8 - View
Eutrema salsugineum Thhalv10018014m.g K11644 - paired amphipathic helix protein Sin3a (SIN3A) scaffold_9 - View
Eutrema salsugineum Thhalv10009361m.g PTHR12346 - SIN3B-RELATED scaffold_5 + View
Eutrema salsugineum Thhalv10006620m.g K11644 - paired amphipathic helix protein Sin3a (SIN3A) scaffold_5 - View
Fragaria x ananassa FAN12G3339 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Fvb4-3 + View
Fragaria x ananassa FAN07G2349 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Fvb4-4 + View
Fragaria x ananassa FAN17G1325 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Fvb4-2 + View
Fragaria x ananassa FAN22G2288 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Fvb4-1 - View
Fragaria vesca FvH4_4g35300 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Fvb4 - View
Gossypium hirsutum Gohir.A03G144200 K11644 - paired amphipathic helix protein Sin3a (SIN3A) A03 - View
Gossypium hirsutum Gohir.D04G052000 K11644 - paired amphipathic helix protein Sin3a (SIN3A) D04 + View
Gossypium hirsutum Gohir.A05G362400 K11644 - paired amphipathic helix protein Sin3a (SIN3A) A05 - View
Glycine max Glyma.08G292900 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Gm08 - View
Glycine max Glyma.02G026700 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Gm02 + View
Glycine max Glyma.01G038250 PTHR12346:SF8 - PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 1-RELATED Gm01 - View
Glycine max Glyma.13G067600 PTHR12346:SF6 - PAIRED AMPHIPATHIC HELIX REPEAT-CONTAINING PROTEIN Gm13 - View
Glycine max Glyma.18G130300 PTHR12346 - SIN3B-RELATED Gm18 + View
Gossypium raimondii Gorai.005G187800 Chr05 - View
Gossypium raimondii Gorai.012G058200 Chr12 + View
Hydrangea macrophylla Hma1.2p1_0289F.1_g114550 Hma1.2p1_0289F.1 + View
Hydrangea macrophylla Hma1.2p1_0265F.1_g106320 Hma1.2p1_0265F.1 - View
Lupinus albus Lalb_Chr21g0319171 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Lalb_Chr21 + View
Lotus japonicus Lj2g0011859 K11644 - paired amphipathic helix protein Sin3a (SIN3A) chr2 - View
Lotus japonicus Lj2g0021309 K11644 - paired amphipathic helix protein Sin3a (SIN3A) chr2 + View
Lonicera japonica Lj6C798G9 GWHAAZE00000006 + View
Lonicera japonica Lju41A28G115 GWHAAZE00000094 + View
Lonicera japonica Lj5A120G52 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_2_90740 Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_3_49260 Lsat_1_v8_lg_3 - View
Lactuca sativa Lsat_1_v5_gn_8_161620 PTHR12346 - SIN3B-RELATED Lsat_1_v8_lg_8 - View
Malus domestica MD09G1041300 SIN3-like 2 Chr09 - View
Malus domestica MD16G1083700 SIN3-like 4 Chr16 + View
Malus domestica MD13G1084700 SIN3-like 4 Chr13 + View
Malus domestica MD17G1042600 SIN3-like 2 Chr17 - View
Manihot esculenta Manes.01G194400 Chromosome01 + View
Manihot esculenta Manes.05G093400 Chromosome05 - View
Medicago truncatula Medtr5g036670 paired amphipathic helix SIN3-like protein chr5 - View
Nelumbo nucifera Nn4g22953 chr4 - View
Nicotiana tabacum Nitab4.5_0001030g0110 Histone deacetylase interacting, Paired amphipathic helix Nitab4.5_0001030 + View
Petunia axillaris Peaxi162Scf00129g00728 Paired amphipathic helix protein Sin3-like 2 Peaxi162Scf00129 + View
Petunia axillaris Peaxi162Scf00828g00015 Paired amphipathic helix protein Sin3-like 3 Peaxi162Scf00828 - View
Punica granatum PGR142G2915 NC_045128.1 - View
Prunus persica Prupe.1G262300 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Pp01 - View
Papaver somniferum PSO161G0028 NW_020649304.1 + View
Papaver somniferum PSO478G4498 NC_039361.1 - View
Populus trichocarpa Potri.010G038700 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Chr10 - View
Populus trichocarpa Potri.008G192200 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Chr08 + View
Phaseolus vulgaris Phvul.003G056400 K11644 - paired amphipathic helix protein Sin3a (SIN3A) Chr03 - View
Phaseolus vulgaris Phvul.002G077800 Chr02 - View
Quercus lobata QL03p067436 3 - View
Rosa chinensis RcHm_v2.0_Chr4g0444901 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim12G0126800 chr12 - View
Rhododendron simsii Rhsim08G0062900 chr08 - View
Rhododendron simsii Rhsim12G0051100 chr12 + View
Striga asiatica SGA_v2.0_scaffold8G04282 scaffold8 - View
Striga asiatica SGA_v2.0_scaffold166G38313 scaffold166 + View
Salvia bowleyana SalBow8G2280 GWHASIU00000004 - View
Salvia bowleyana SalBow2G0101 GWHASIU00000007 - View
Salvia bowleyana SalBow2G2720 GWHASIU00000007 - View
Salix brachista Sabra08G0145700 GWHAAZH00000008 + View
Sechium edule Sed0005931 LG04 - View
Sechium edule Sed0017791 LG06 + View
Solanum lycopersicum Solyc02g087360.4 Paired amphipathic helix protein Sin3-like 1 (AHRD V3.3 *** A0A1U8G0F5_CAPAN) SL4.0ch02 - View
Solanum lycopersicum Solyc05g006540.3 Paired amphipathic helix protein Sin3-like 4 (AHRD V3.3 *** A0A2G2YE30_CAPAN) SL4.0ch05 - View
Schrenkiella parvula Sp5g25130 PTHR12346:SF8 - PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 1-RELATED ch5-6 + View
Schrenkiella parvula Sp1g21550 PF02671 - Paired amphipathic helix repeat (PAH) ch1-1 - View
Solanum pennellii Sopen02g016700 Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190). | SIN3-like 2 (SNL2) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting , Paired amphipathic helix | BEST Arabidopsis thaliana protein match is: SIN3-like 1 ., Histone deacetylase interacting Spenn-ch02 + View
Solanum pennellii Sopen05g002490 Encodes SIN3-like 1, a homolog of the transcriptional repressor SIN3 (AT1G24190). | SIN3-like 1 (SNL1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting , Paired amphipathic helix | BEST Arabidopsis thaliana protein match is: SIN3-like 2 . Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400001399 Paired amphipathic helix protein Sin3-like 2 ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400022606 WRKY domain class transcription factor ST4.03ch05 + View
Selenicereus undatus Hund05933 Scaffold_19641 - View
Selenicereus undatus Hund25301 Scaffold_3410 - View
Trochodendron aralioides TAR371G0714 group13 - View
Trochodendron aralioides TAR629G1864 group0 + View
Theobroma cacao Thecc.02G238600 WRKY domain class transcription factor Chromosome_2 + View
Tarenaya hassleriana THA.LOC104822068 paired amphipathic helix protein Sin3-like 3 NW_010966617.1 - View
Tarenaya hassleriana THA.LOC104805422 paired amphipathic helix protein Sin3-like 2 isoform X1 NW_010961290.1 - View
Tarenaya hassleriana THA.LOC104808829 paired amphipathic helix protein Sin3-like 3 isoform X1 NW_010960187.1 + View
Tripterygium wilfordii TWI18G0523 NC_052241.1 + View
Tripterygium wilfordii TWI12G1163 NC_052243.1 + View
Tripterygium wilfordii TWI75G0044 NC_052253.1 - View
Vaccinium macrocarpon vmacro16299 Similar to SNL3: Paired amphipathic helix protein Sin3-like 3 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro01207 Similar to SNL4: Paired amphipathic helix protein Sin3-like 4 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G0505 CM024074.1 + View
Vitis vinifera GSVIVG01032579001 chr14 + View
Vitis vinifera GSVIVG01020136001 chr1 - View