Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG10G1020 | LG-10 | + | View | |
Acer truncatum | Atru.chr3.2254 | chr3 | - | View | |
Actinidia chinensis | Actinidia16266 | Lachesis_group24 | - | View | |
Actinidia chinensis | Actinidia06854 | Lachesis_group13 | - | View | |
Arabidopsis lyrata | AL1G63290 | scaffold_1 | + | View | |
Avicennia marina | MSTRG.20952 | ScioBoG_26769_HRSCAF_26899 | - | View | |
Arabidopsis thaliana | AT1G55250 | histone mono-ubiquitination 2 Encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B. histone mono-ubiquitination 2 (HUB2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: histone mono-ubiquitination 1 (TAIR:AT2G44950.1)%3B Has 74071 Blast hits to 42895 proteins in 2604 species: Archae - 973%3B Bacteria - 11117%3B Metazoa - 35835%3B Fungi - 6236%3B Plants - 4620%3B Viruses - 230%3B Other Eukaryotes - 15060 (source: NCBI BLink). | Chr1 | + | View |
Brassica carinata | BcaB04g16970 | ChrB04 | - | View | |
Brassica carinata | BcaC01g01497 | ChrC01 | - | View | |
Brassica napus | A08p00780 | A08 | - | View | |
Brassica rapa | BraA08t32135Z | A08 | - | View | |
Corylus avellana | Haze_22986 | Similar to HUB2: E3 ubiquitin-protein ligase BRE1-like 2 (Arabidopsis thaliana OX%3D3702) | 6 | - | View |
Citrus clementina | Ciclev10014206m.g | scaffold_2 | - | View | |
Carpinus fangiana | Cfa009612 | Cfa04 | - | View | |
Cardamine hirsuta | CARHR044900 | E3 ubiquitin-protein ligase BRE1-like 2 | Chr1 | + | View |
Carya illinoinensis | CiPaw.13G173000 | PTHR23163//PTHR23163:SF0 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1 | Chr13 | + | View |
Carica papaya | Cpa.g.sc119.82 | supercontig_119 | - | View | |
Capsella rubella | Carub.0001s4375 | PTHR23163//PTHR23163:SF0 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1 | scaffold_1 | + | View |
Durio zibethinus | Duzib150G0082 | NW_019167882.1 | + | View | |
Erigeron canadensis | ECA233G3012 | Conyza_canadensis_scaffold:1 | + | View | |
Eucalyptus grandis | Eucgr.J01791 | Chr10 | - | View | |
Erythranthe guttata | Migut.D02533 | scaffold_4 | - | View | |
Eutrema salsugineum | Thhalv10011229m.g | PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 | scaffold_7 | - | View |
Fragaria x ananassa | FAN21G1555 | K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) | Fvb3-2 | + | View |
Fragaria x ananassa | FAN11G1041 | K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) | Fvb3-4 | - | View |
Fragaria x ananassa | FAN25G3163 | K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) | Fvb3-1 | - | View |
Fragaria vesca | FvH4_3g44811 | PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 | Fvb3 | + | View |
Lonicera japonica | Lj2C713G1 | GWHAAZE00000002 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_6_52501 | PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 | Lsat_1_v8_lg_6 | + | View |
Manihot esculenta | Manes.15G105500 | Chromosome15 | + | View | |
Nelumbo nucifera | Nn7g35936 | chr7 | - | View | |
Petunia axillaris | Peaxi162Scf00100g00714 | E3 ubiquitin-protein ligase BRE1-like 2 | Peaxi162Scf00100 | + | View |
Papaver somniferum | PSO339G1017 | NC_039366.1 | - | View | |
Populus trichocarpa | Potri.001G008800 | K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) | Chr01 | - | View |
Populus trichocarpa | Potri.003G216651 | PTHR23163//PTHR23163:SF0 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1 | Chr03 | + | View |
Quercus lobata | QL01p007971 | 1 | + | View | |
Rhododendron simsii | Rhsim01G0185500 | chr01 | - | View | |
Salix brachista | Sabra01G0006800 | GWHAAZH00000001 | - | View | |
Solanum lycopersicum | Solyc01g006040.3 | E3 ubiquitin protein ligase (AHRD V3.3 *** A0A2I4FSG3_9ROSI) | SL4.0ch01 | - | View |
Schrenkiella parvula | Sp1g40910 | PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 | ch1-2 | + | View |
Solanum pennellii | Sopen01g002040 | Encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B. | histone mono-ubiquitination 2 (HUB2) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: histone mono-ubiquitination 1 . | Spenn-ch01 | - | View |
Trochodendron aralioides | TAR633G1852 | group2 | - | View | |
Theobroma cacao | Thecc.09G213500 | E3 ubiquitin-protein ligase BRE1-like 2 | Chromosome_9 | - | View |
Tripterygium wilfordii | TWI34G1236 | NC_052235.1 | + | View |