Gene: Potri.003G216651

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.003G216651
  • Transcript Identifier Potri.003G216651.1
  • Gene Type Coding gene
  • Location Chr03 : 21232139-21235109 : positive

Gene Family Information

  • ID HOM05D001240
  • #Genes/#Species 503/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.003G216651.v4.1
  • pacid 42787365

Descriptions

  • Description PTHR23163//PTHR23163:SF0 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010390
IEA
InterProhistone monoubiquitination
GO:0010162
ISO
PLAZA Integrative Orthologyseed dormancy process AT1G55250
GO:0045087
ISO
PLAZA Integrative Orthologyinnate immune response AT1G55250
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT1G55250
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT1G55250
GO:0033523
ISO
PLAZA Integrative Orthologyhistone H2B ubiquitination AT1G55250

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT1G55250

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G55250

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013956 E3 ubiquitin ligase Bre1
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase