Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.1134 chr5 + View
Actinidia chinensis Actinidia21041 Lachesis_group9 - View
Arabidopsis lyrata AL4G47150 scaffold_4 + View
Avicennia marina MSTRG.21638 ScioBoG_26769_HRSCAF_26899 - View
Aquilegia oxysepala Aqoxy5G00765 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q4WYMC K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q3TEZS K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT2G47580 spliceosomal protein U1A encodes spliceosomal protein U1A spliceosomal protein U1A (U1A)%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: response to salt stress%2C nuclear mRNA splicing%2C via spliceosome%3B LOCATED IN: nucleolus%2C nucleus%2C U1 snRNP%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: U2 small nuclear ribonucleoprotein B (TAIR:AT2G30260.1)%3B Has 2473 Blast hits to 2417 proteins in 290 species: Archae - 0%3B Bacteria - 37%3B Metazoa - 1259%3B Fungi - 517%3B Plants - 407%3B Viruses - 1%3B Other Eukaryotes - 252 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB02g08761 ChrB02 - View
Brassica napus A05p00350 A05 - View
Brassica napus C04p00270 C04 - View
Brassica oleracea BolC4t21670H C4 - View
Brassica rapa BraA05t19033Z A05 - View
Beta vulgaris EL10Ac7g17527 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) Chr7_EL10_PGA_scaffold5 - View
Camellia sinensis var. sinensis CSS0009091 PREDICTED: U1 small nuclear ribonucleoprotein A isoform X2 [Nelumbo nucifera] Chr13 - View
Camellia sinensis var. sinensis CSS0049508 PREDICTED: U1 small nuclear ribonucleoprotein A isoform X2 [Nelumbo nucifera] Chr11 + View
Cannabis sativa CANSAT25G2573 NC_044370.1 - View
Cicer arietinum L. Ca_09178_v3 Ca_LG3_v3 - View
Corylus avellana Haze_04951 Similar to U1A: U1 small nuclear ribonucleoprotein A (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc01_g20950 U1 small nuclear ribonucleoprotein A chr1 - View
Citrus clementina Ciclev10021907m.g scaffold_3 - View
Carpinus fangiana Cfa005901 Cfa02 + View
Cardamine hirsuta CARHR142980 U1 small nuclear ribonucleoprotein A Chr4 + View
Carya illinoinensis CiPaw.08G094500 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) Chr08 + View
Carya illinoinensis CiPaw.07G110300 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) Chr07 - View
Cucumis melo MELO3C017951.2 U1 small nuclear ribonucleoprotein A chr07 + View
Chenopodium quinoa AUR62008680 U1A: U1 small nuclear ribonucleoprotein A C_Quinoa_Scaffold_1710 - View
Chenopodium quinoa AUR62025564 U1A: U1 small nuclear ribonucleoprotein A C_Quinoa_Scaffold_2773 + View
Capsella rubella Carub.0004s3031 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) scaffold_4 + View
Cucumis sativus L. CsaV3_4G000860 U1 small nuclear ribonucleoprotein like chr4 - View
Davidia involucrata Dinv33061 GWHABJS00000010 - View
Durio zibethinus Duzib133G0160 NW_019167938.1 + View
Durio zibethinus Duzib138G1662 NW_019167893.1 + View
Erigeron canadensis ECA236G3487 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.K03491 Chr11 - View
Erythranthe guttata Migut.D00145 scaffold_4 + View
Eutrema salsugineum Thhalv10001603m.g K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) scaffold_22 + View
Fragaria x ananassa FAN15G0253 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) Fvb2-4 - View
Fragaria x ananassa FAN27G3356 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) Fvb2-1 - View
Fragaria x ananassa FAN20G1605 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) Fvb2-3 - View
Fragaria x ananassa FAN24G2234 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) Fvb2-2 + View
Fragaria vesca FvH4_2g25850 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) Fvb2 - View
Gossypium hirsutum Gohir.A12G129800 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) A12 + View
Gossypium hirsutum Gohir.D08G086200 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) D08 - View
Gossypium hirsutum Gohir.A08G076600 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) A08 - View
Gossypium raimondii Gorai.004G090600 Chr04 - View
Gossypium raimondii Gorai.008G144600 Chr08 + View
Hydrangea macrophylla Hma1.2p1_0494F.1_g165240 Hma1.2p1_0494F.1 - View
Lotus japonicus Lj1g0019364 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) chr1 - View
Lonicera japonica Lj2A1196T51 GWHAAZE00000002 - View
Lonicera japonica Lj1A23T83 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_8_164180 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) Lsat_1_v8_lg_8 - View
Magnolia biondii MBI18_g24868_MAGBIO AED:0.11 Chr18 + View
Malus domestica MD03G1289700 spliceosomal protein U1A Chr03 - View
Malus domestica MD11G1308500 spliceosomal protein U1A Chr11 + View
Manihot esculenta Manes.01G220300 Chromosome01 - View
Medicago truncatula Medtr7g108715 small nuclear ribonucleoprotein chr7 - View
Nicotiana tabacum Nitab4.5_0001879g0140 RNA recognition motif domain, Nucleotide-binding, alpha-beta plait, U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B'' Nitab4.5_0001879 - View
Oryza sativa ssp. japonica Os05g0154800 Similar to U1snRNP-specific protein, U1A. chr05 + View
Petunia axillaris Peaxi162Scf00001g00429 U2 small nuclear ribonucleoprotein B Peaxi162Scf00001 + View
Punica granatum PGR044G2466 NC_045134.1 - View
Prunus persica Prupe.8G262900 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) Pp08 - View
Papaver somniferum PSO832G2009 NC_039367.1 + View
Populus trichocarpa Potri.014G127800 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) Chr14 + View
Populus trichocarpa Potri.002G203600 PTHR10501//PTHR10501:SF17 - U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B // U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A Chr02 + View
Quercus lobata QL12p028301 12 + View
Rosa chinensis RcHm_v2.0_Chr6g0294181 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim01G0286000 chr01 - View
Salvia bowleyana SalBow3G2990 GWHASIU00000006 - View
Salix brachista Sabra02G0155700 GWHAAZH00000002 - View
Sechium edule Sed0023774 LG06 + View
Solanum lycopersicum Solyc09g075200.4 U2 small nuclear ribonucleoprotein B (AHRD V3.3 *** A0A2U1L5Q9_ARTAN) SL4.0ch09 - View
Schrenkiella parvula Sp4g29510 K11091 - U1 small nuclear ribonucleoprotein A (SNRPA) ch4-6 + View
Solanum pennellii Sopen09g030020 encodes spliceosomal protein U1A | spliceosomal protein U1A (U1A) | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: response to salt stress, nuclear mRNA splicing, via spliceosome | LOCATED IN: nucleolus, nucleus, U1 snRNP | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: U2 small nuclear ribonucleoprotein B Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400031814 U1snRNP-specific protein, U1A ST4.03ch09 - View
Selenicereus undatus Hund05434 Scaffold_19641 - View
Trochodendron aralioides TAR365G0875 group16 + View
Theobroma cacao Thecc.01G301800 Spliceosomal protein U1A Chromosome_1 - View
Tarenaya hassleriana THA.LOC104817487 U1 small nuclear ribonucleoprotein A NW_010965946.1 + View
Tarenaya hassleriana THA.LOC104802177 U1 small nuclear ribonucleoprotein A-like NW_010970490.1 - View
Trifolium pratense TPR.G9641 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI14G0395 NC_052249.1 + View
Tripterygium wilfordii TWI23G0687 NC_052239.1 + View
Utricularia gibba unitig_0.g669 unitig_0 - View
Vaccinium macrocarpon vmacro15152 Similar to U1A: U1 small nuclear ribonucleoprotein A (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01028031001 chr7 - View