Gene: CSS0049508

General Information

Structural Information

Species Camellia sinensis var. sinensis
Gene Identifier CSS0049508
Transcript Identifier CSS0049508.1
Gene Type Coding gene
Location Chr11 : 7860902-7864147 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002411
#Genes/#Species 281/98
Phylogenetic origin

ID ORTHO05D002564
#Genes/#Species 279/98
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid CSS0049508.1

Descriptions

Short descriptions
Ortholog descriptions

Description PREDICTED: U1 small nuclear ribonucleoprotein A isoform X2 [Nelumbo nucifera]

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009651	ISO	PLAZA Integrative Orthology	response to salt stress	AT2G47580

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT2G47580
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT2G47580
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT2G47580
GO:0005685	ISO	PLAZA Integrative Orthology	U1 snRNP	AT2G47580

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR035979	RNA-binding domain superfamily

Mapman id	Description
16.2.1.1.2	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).protein factor (U1A)