Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG7G5660 | LG-7 | + | View | |
| Aethionema arabicum | Aa31LG4G7480 | LG-4 | - | View | |
| Acer truncatum | Atru.chr13.1511 | chr13 | + | View | |
| Actinidia chinensis | Actinidia15224 | Lachesis_group26 | + | View | |
| Actinidia chinensis | Actinidia03460 | Lachesis_group27 | - | View | |
| Actinidia chinensis | Actinidia21297 | Lachesis_group28 | + | View | |
| Actinidia chinensis | Actinidia29478 | Lachesis_group7 | - | View | |
| Arabidopsis lyrata | AL2G37670 | scaffold_2 | - | View | |
| Avicennia marina | MSTRG.25372 | ScioBoG_4119_HRSCAF_4138 | - | View | |
| Avicennia marina | MSTRG.1421 | ScioBoG_102833_HRSCAF_103052 | + | View | |
| Aquilegia oxysepala | Aqoxy6G00254 | CHR06 | + | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.N36HW8 | K10755 - replication factor C subunit 2/4 (RFC2_4) | arahy.Tifrunner.gnm1.Arahy.17 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.R82D2M | PTHR11669//PTHR11669:SF17 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // REPLICATION FACTOR C SUBUNIT 4 | arahy.Tifrunner.gnm1.Arahy.08 | + | View |
| Arabidopsis thaliana | AT1G77470 | replication factor C subunit 3 Encodes a protein with high homology to the Replication Factor C%2C Subunit 3 (RFC3) of yeast and other eukaryotes. rfc3 mutants are hypersensitive to salicylic acid and exhibit enhanced induction of PR genes and resistance against virulent oomycete Hyaloperonospora arabidopsidis Noco2. The enhanced pathogen resistance in the mutant is NPR1-independent. replication factor C subunit 3 (RFC3)%3B FUNCTIONS IN: in 6 functions%3B INVOLVED IN: negative regulation of defense response%3B LOCATED IN: DNA replication factor C complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C Replication factor C (InterPro:IPR013748)%2C DNA polymerase III%2C clamp loader complex%2C gamma/delta/delta subunit%2C C-terminal (InterPro:IPR008921)%3B BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1)%3B Has 17584 Blast hits to 17541 proteins in 2810 species: Archae - 637%3B Bacteria - 9895%3B Metazoa - 902%3B Fungi - 991%3B Plants - 392%3B Viruses - 88%3B Other Eukaryotes - 4679 (source: NCBI BLink). | Chr1 | - | View |
| Brassica carinata | BcaB05g25051 | ChrB05 | - | View | |
| Brassica napus | C06p31240 | C06 | + | View | |
| Brassica napus | A06p17770 | A06 | + | View | |
| Brassica napus | C02p34610 | C02 | - | View | |
| Brassica napus | A07p27990 | A07 | + | View | |
| Brassica napus | A02p21300 | A02 | - | View | |
| Brassica oleracea | BolC5t30765H | C5 | + | View | |
| Brassica oleracea | BolC2t09486H | C2 | - | View | |
| Brassica rapa | BraA02t07148Z | A02 | - | View | |
| Brassica rapa | BraA07t30444Z | A07 | + | View | |
| Brassica rapa | BraA06t24869Z | A06 | + | View | |
| Beta vulgaris | EL10Ac1g01041 | PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 | Chr1_EL10_PGA_scaffold3 | + | View |
| Camellia sinensis var. sinensis | CSS0028817 | replication factor C 36 kDA family protein [Populus trichocarpa] | Chr9 | + | View |
| Camellia sinensis var. sinensis | CSS0038151 | replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] | Chr4 | - | View |
| Cannabis sativa | CANSAT25G1662 | NC_044370.1 | + | View | |
| Cicer arietinum L. | Ca_16563_v3 | Ca_LG5_v3 | - | View | |
| Corylus avellana | Haze_17510 | Similar to RFC3: Replication factor C subunit 3 (Oryza sativa subsp. japonica OX%3D39947) | 7 | + | View |
| Coffea canephora | Cc10_g12180 | Replication factor C subunit 5 | chr10 | + | View |
| Citrus clementina | Ciclev10001597m.g | scaffold_5 | + | View | |
| Cardamine hirsuta | CARHR070990 | replication factor C subunit 3 | Chr2 | - | View |
| Citrullus lanatus | ClCG08G005860 | Replication factor C subunit | CG_Chr08 | + | View |
| Cucumis melo | MELO3C010631.2 | replication factor C subunit 5 | chr03 | - | View |
| Cucumis melo | MELO3C010507.2 | Replication factor C subunit | chr07 | - | View |
| Carica papaya | Cpa.g.sc64.112 | supercontig_64 | + | View | |
| Chenopodium quinoa | AUR62014313 | RFC3: Replication factor C subunit 3 | C_Quinoa_Scaffold_1566 | - | View |
| Capsella rubella | Carub.0002s2436 | PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 | scaffold_2 | - | View |
| Cucumis sativus L. | CsaV3_6G034260 | replication factor C subunit 5 | chr6 | - | View |
| Cucumis sativus L. | CsaV3_4G028050 | replication factor C subunit 4 | chr4 | - | View |
| Davidia involucrata | Dinv27288 | GWHABJS00000002 | + | View | |
| Durio zibethinus | Duzib093G1303 | NW_019167937.1 | + | View | |
| Durio zibethinus | Duzib116G0621 | NW_019167949.1 | + | View | |
| Erythranthe guttata | Migut.C01109 | scaffold_3 | + | View | |
| Eutrema salsugineum | Thhalv10018756m.g | PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 | scaffold_9 | + | View |
| Fragaria x ananassa | FAN20G1865 | PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 | Fvb2-3 | + | View |
| Fragaria x ananassa | FAN15G1146 | PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 | Fvb2-4 | + | View |
| Fragaria x ananassa | FAN27G0086 | PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 | Fvb2-1 | - | View |
| Fragaria vesca | FvH4_2g27410 | PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 | Fvb2 | + | View |
| Gossypium hirsutum | Gohir.A05G236800 | KOG0990 - Replication factor C, subunit RFC5 | A05 | + | View |
| Gossypium hirsutum | Gohir.D05G238900 | KOG0990 - Replication factor C, subunit RFC5 | D05 | + | View |
| Glycine max | Glyma.06G114100 | PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 | Gm06 | - | View |
| Gossypium raimondii | Gorai.009G247600 | Chr09 | + | View | |
| Hydrangea macrophylla | Hma1.2p1_0129F.1_g060420 | Hma1.2p1_0129F.1 | + | View | |
| Lupinus albus | Lalb_Chr08g0241231 | PTHR11669//PTHR11669:SF17 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // REPLICATION FACTOR C SUBUNIT 4 | Lalb_Chr08 | + | View |
| Lotus japonicus | Lj1g0008455 | PTHR11669//PTHR11669:SF9 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // REPLICATION FACTOR C SUBUNIT 5 | chr1 | + | View |
| Lonicera japonica | Lj7C346G4 | GWHAAZE00000007 | - | View | |
| Lonicera japonica | Lj4A633G16 | GWHAAZE00000004 | + | View | |
| Malus domestica | MD15G1344500 | ATPase family associated with various cellular activities (AAA) | Chr15 | + | View |
| Manihot esculenta | Manes.02G166700 | Chromosome02 | - | View | |
| Manihot esculenta | Manes.18G079501 | Chromosome18 | + | View | |
| Medicago truncatula | Medtr3g088120 | replication factor C subunit 5 | chr3 | - | View |
| Olea europaea | Oeu001535.1 | chr23 | + | View | |
| Punica granatum | PGR044G0726 | NC_045134.1 | + | View | |
| Prunus persica | Prupe.1G492200 | Pp01 | + | View | |
| Pisum sativum | Psat5g085800 | Replication factor C C-terminal domain | chr5LG3 | + | View |
| Papaver somniferum | PSO170G0410 | NC_039360.1 | - | View | |
| Papaver somniferum | PSO528G0178 | NW_020653081.1 | + | View | |
| Populus trichocarpa | Potri.005G180001 | PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 | Chr05 | + | View |
| Phaseolus vulgaris | Phvul.009G126000 | PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 | Chr09 | - | View |
| Quercus lobata | QL09p033191 | 9 | + | View | |
| Rosa chinensis | RcHm_v2.0_Chr6g0296261 | RcHm_v2.0_Chr6 | + | View | |
| Rhododendron simsii | Rhsim11G0069700 | chr11 | + | View | |
| Salvia bowleyana | SalBow7G2997 | GWHASIU00000005 | - | View | |
| Salix brachista | Sabra02G0063600 | GWHAAZH00000002 | - | View | |
| Sechium edule | Sed0023365 | LG03 | + | View | |
| Solanum lycopersicum | Solyc06g060150.3 | Replication factor C subunit 5 (AHRD V3.3 *** A0A2G3C770_CAPCH) | SL4.0ch06 | + | View |
| Schrenkiella parvula | Sp5g32630 | PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 | ch5-7 | - | View |
| Solanum pennellii | Sopen06g020270 | Encodes a protein with high homology to the Replication Factor C, Subunit 3 (RFC3) of yeast and other eukaryotes. rfc3 mutants are hypersensitive to salicylic acid and exhibit enhanced induction of PR genes and resistance against virulent oomycete Hyaloperonospora arabidopsidis Noco2. The enhanced pathogen resistance in the mutant is NPR1-independent. | replication factor C subunit 3 (RFC3) | FUNCTIONS IN: in 6 functions | INVOLVED IN: negative regulation of defense response | LOCATED IN: DNA replication factor C complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core , ATPase, AAA-type, core , Replication factor C , DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal | BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) | Spenn-ch06 | + | View |
| Solanum pennellii | Sopen11g007560 | embryo defective 1968 (EMB1968) | FUNCTIONS IN: in 6 functions | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: DNA replication factor C complex | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core , ATPase, AAA-type, core , DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal , Replication factor C | BEST Arabidopsis thaliana protein match is: replication factor C 2 . | Spenn-ch11 | + | View |
| Selenicereus undatus | Hund17307 | Scaffold_33675 | + | View | |
| Trochodendron aralioides | TAR376G0409 | group14 | - | View | |
| Trochodendron aralioides | TAR628G0775 | group5 | - | View | |
| Theobroma cacao | Thecc.08G128800 | Chromosome_8 | + | View | |
| Tarenaya hassleriana | THA.LOC104800207 | replication factor C subunit 5 | NW_010969032.1 | + | View |
| Trifolium pratense | TPR.G21071 | Tp57577_TGAC_v2_LG2 | + | View | |
| Tripterygium wilfordii | TWI60G0500 | NC_052246.1 | + | View | |
| Vaccinium macrocarpon | vmacro00847 | Similar to RFC5: Replication factor C subunit 5 (Arabidopsis thaliana OX%3D3702) | chr1_Vaccinium_macrocarpon_Stevens_v1 | - | View |
| Vitis vinifera | GSVIVG01008825001 | chr18 | + | View |