Gene: Sopen11g007560

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g007560
  • Transcript Identifier Sopen11g007560.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 5675081-5685202 : positive

Gene Family Information

  • ID HOM05D001470
  • #Genes/#Species 431/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g007560.1

Descriptions

  • Description embryo defective 1968 (EMB1968) | FUNCTIONS IN: in 6 functions | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: DNA replication factor C complex | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ATPase, AAA-type, core , DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal , Replication factor C | BEST Arabidopsis thaliana protein match is: replication factor C 2 .
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
InterProDNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G21690

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR013748 Replication factor C, C-terminal
IPR003593 AAA+ ATPase domain
IPR000641 CbxX/CfxQ
Mapman id Description
13.2.3.4.2.4 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC4