Gene: AT1G77470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G77470
  • Transcript Identifier AT1G77470.1
  • Gene Type Coding gene
  • Location Chr1 : 29112194-29114323 : negative

Gene Family Information

  • ID HOM05D001470
  • #Genes/#Species 431/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G77470.1
  • symbol RFC3
  • Alias EMB2810,EMBRYO DEFECTIVE 2810,RFC5,replication factor C 5
  • uniprot Q9CAQ8

Descriptions

  • Description replication factor C subunit 3
  • Computational description replication factor C subunit 3 (RFC3); FUNCTIONS IN: in 6 functions; INVOLVED IN: negative regulation of defense response; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 17584 Blast hits to 17541 proteins in 2810 species: Archae - 637; Bacteria - 9895; Metazoa - 902; Fungi - 991; Plants - 392; Viruses - 88; Other Eukaryotes - 4679 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication
GO:0006952
IEA
GOA Databasedefense response
GO:0031348
IMP
Gene Ontologynegative regulation of defense response1
GO:0006281
IBA
Gene OntologyDNA repair2
GO:0006261
IBA
Gene OntologyDNA-dependent DNA replication2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003689
IBA
Gene OntologyDNA clamp loader activity2
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IBA
Gene Ontologynucleus2
GO:0005663
IBA
Gene OntologyDNA replication factor C complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR003959 ATPase, AAA-type, core
IPR003593 AAA+ ATPase domain
IPR013748 Replication factor C, C-terminal
Mapman id Description
13.2.3.4.2.5 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC5