Gene: Carub.0002s2436

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0002s2436
Transcript Identifier Carub.0002s2436.1
Gene Type Coding gene
Location scaffold_2 : 12768132-12770457 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001470
#Genes/#Species 431/100
Phylogenetic origin

ID ORTHO05D006756
#Genes/#Species 138/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Carub.0002s2436.v1.1
pacid 39244299
synonym Carubv10020461m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006260	IEA	InterPro	DNA replication
GO:0031348	ISO	PLAZA Integrative Orthology	negative regulation of defense response	AT1G77470

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005524	IEA	InterPro	ATP binding
GO:0016887	IEA	InterPro	ATP hydrolysis activity
GO:0003677	IEA	InterPro	DNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G77470

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR003959	ATPase, AAA-type, core
IPR013748	Replication factor C, C-terminal
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR003593	AAA+ ATPase domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Mapman id	Description
13.2.3.4.2.5	Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC5