Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold11G05857 scaffold11 - View
SGA_v2.0_scaffold162G37920 scaffold162 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G5760 LG-4 - View
Aethionema arabicum Aa31LG1G14880 LG-1 - View
Acer truncatum Atru.chr5.3106 chr5 - View
Acer truncatum Atru.chr13.368 chr13 + View
Actinidia chinensis Actinidia15382 Lachesis_group26 + View
Actinidia chinensis Actinidia00562 Lachesis_group12 + View
Actinidia chinensis Actinidia29800 Lachesis_group27 + View
Actinidia chinensis Actinidia22499 Lachesis_group28 + View
Arabidopsis lyrata AL1G32500 scaffold_1 - View
Arabidopsis lyrata AL2G35510 scaffold_2 - View
Avicennia marina MSTRG.1233 ScioBoG_102833_HRSCAF_103052 + View
Avicennia marina MSTRG.25212 ScioBoG_4119_HRSCAF_4138 - View
Avicennia marina MSTRG.24269 ScioBoG_4088_HRSCAF_4107 + View
Aquilegia oxysepala Aqoxy5G01509 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NWGY5G PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q8MHA7 PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Y15ID5 PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F7N9UG PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT1G19790 SHI-related sequence 7 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence%2C many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium%2C stamen and leaf development in Arabidopsis. SHI-related sequence 7 (SRS7)%3B CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1%2C C-terminal (InterPro:IPR006511)%2C Zinc finger%2C Lateral Root Primordium type 1 (InterPro:IPR006510)%2C Protein of unknown function DUF702 (InterPro:IPR007818)%3B BEST Arabidopsis thaliana protein match is: SHI-related sequence 5 (TAIR:AT1G75520.1)%3B Has 184 Blast hits to 184 proteins in 22 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 8%3B Plants - 174%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). SHI-related sequence 7 (SRS7)%3B CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1%2C C-terminal (InterPro:IPR006511)%2C Zinc finger%2C Lateral Root Primordium type 1 (InterPro:IPR006510)%2C Protein of unknown function DUF702 (InterPro:IPR007818)%3B BEST Arabidopsis thaliana protein match is: SHI-related sequence 5 (TAIR:AT1G75520.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G75520 SHI-related sequence 5 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence%2C many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium%2C stamen and leaf development in Arabidopsis. SHI-related sequence 5 (SRS5)%3B CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1%2C C-terminal (InterPro:IPR006511)%2C Zinc finger%2C Lateral Root Primordium type 1 (InterPro:IPR006510)%2C Protein of unknown function DUF702 (InterPro:IPR007818)%3B BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2)%3B Has 299 Blast hits to 299 proteins in 34 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 11%3B Fungi - 2%3B Plants - 180%3B Viruses - 0%3B Other Eukaryotes - 104 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC08g47344 ChrC08 + View
Brassica carinata BcaC08g47033 ChrC08 - View
Brassica carinata BcaB05g24916 ChrB05 - View
Brassica carinata BcaC03g15585 ChrC03 - View
Brassica carinata BcaB07g31993 ChrB07 - View
Brassica napus C06p49510 C06 - View
Brassica napus A02p19990 A02 - View
Brassica napus C06p32550 C06 + View
Brassica napus A07p28780 A07 + View
Brassica napus A07p41060 A07 - View
Brassica napus C02p32690 C02 - View
Brassica rapa BraA02t07038Z A02 - View
Brassica rapa BraA07t31643Z A07 - View
Brassica rapa BraA07t30519Z A07 + View
Beta vulgaris EL10Ac9g21674 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr9_EL10_PGA_scaffold8 + View
Beta vulgaris EL10Ac1g00566 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Chr1_EL10_PGA_scaffold3 + View
Camellia sinensis var. sinensis CSS0041868 PREDICTED: protein SHI RELATED SEQUENCE 1-like [Nicotiana tomentosiformis] Chr3 + View
Camellia sinensis var. sinensis CSS0017906 PREDICTED: protein SHI RELATED SEQUENCE 5-like [Sesamum indicum] Chr4 + View
Camellia sinensis var. sinensis CSS0018010 hypothetical protein F383_16691 [Gossypium arboreum] Chr9 + View
Capsicum annuum CAN.G358.17 PGAv.1.6.scaffold358 + View
Capsicum annuum CAN.G851.21 PGAv.1.6.scaffold851 + View
Cannabis sativa CANSAT25G3003 NC_044370.1 - View
Cannabis sativa CANSAT01G0495 NC_044373.1 + View
Cicer arietinum L. Ca_02064_v3 Ca_LG1_v3 + View
Cicer arietinum L. Ca_13390_v3 Ca_LG4_v3 - View
Corylus avellana Haze_03824 Similar to SHI: Protein SHORT INTERNODES (Arabidopsis thaliana OX%3D3702) 2 + View
Corylus avellana Haze_22577 Similar to SRS7: Protein SHI RELATED SEQUENCE 7 (Arabidopsis thaliana OX%3D3702) 3 - View
Coffea canephora Cc02_g17110 Putative Lateral root primordium (LRP) protein-related chr2 + View
Coffea canephora Cc10_g02200 Putative SHI-related sequence 5 chr10 + View
Coffea canephora Cc07_g10250 Putative Lateral root primordium (LRP) protein-related chr7 - View
Citrus clementina Ciclev10029805m.g scaffold_8 - View
Citrus clementina Ciclev10001824m.g scaffold_5 - View
Citrus clementina Ciclev10025993m.g scaffold_7 - View
Carpinus fangiana Cfa005071 Cfa02 - View
Carpinus fangiana Cfa013898 Cfa05 - View
Carpinus fangiana Cfa006925 Cfa02 - View
Cardamine hirsuta CARHR020300 SHI-related sequence 7 Chr1 - View
Cardamine hirsuta CARHR068920 SHI-related sequence 5 Chr2 - View
Carya illinoinensis CiPaw.07G154800 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr07 + View
Carya illinoinensis CiPaw.08G062200 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr08 - View
Carya illinoinensis CiPaw.06G131200 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr06 + View
Carya illinoinensis CiPaw.05G071500 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr05 - View
Citrullus lanatus ClCG01G020040 Lateral root primordium family protein CG_Chr01 - View
Citrullus lanatus ClCG05G018620 Lateral root primordium family protein CG_Chr05 + View
Citrullus lanatus ClCG08G014580 Lateral root primordium family protein CG_Chr08 + View
Cucumis melo MELO3C007877.2 Protein SHI RELATED SEQUENCE 1 chr08 - View
Cucumis melo MELO3C010984.2 Protein SHI RELATED SEQUENCE 1 chr03 + View
Cucumis melo MELO3C003781.2 Protein SHI RELATED SEQUENCE 1 chr04 + View
Carica papaya Cpa.g.sc6.196 supercontig_6 + View
Chenopodium quinoa AUR62034552 SHI: Protein SHORT INTERNODES C_Quinoa_Scaffold_1522 - View
Chenopodium quinoa AUR62014445 SHI: Protein SHORT INTERNODES C_Quinoa_Scaffold_1566 + View
Chenopodium quinoa AUR62007636 SRS3: Protein SHI RELATED SEQUENCE 3 C_Quinoa_Scaffold_2646 - View
Capsella rubella Carub.0002s2238 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_2 - View
Capsella rubella Carub.0001s1932 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_1 - View
Cucumis sativus L. CsaV3_6G046800 protein SHI RELATED SEQUENCE 1 chr6 - View
Cucumis sativus L. CsaV3_2G029220 protein SHI RELATED SEQUENCE 1 chr2 - View
Cucumis sativus L. CsaV3_3G045570 protein SHI RELATED SEQUENCE 1 chr3 - View
Daucus carota DCAR_022448 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_025983 hypothetical protein DCARv2_Chr7 - View
Daucus carota DCAR_017509 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_009951 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_013845 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv40041 GWHABJS00000014 + View
Davidia involucrata Dinv31805 GWHABJS00000002 - View
Davidia involucrata Dinv42019 GWHABJS00000002 - View
Davidia involucrata Dinv39479 GWHABJS00000011 - View
Davidia involucrata Dinv23477 GWHABJS00000005 + View
Durio zibethinus Duzib116G0506 NW_019167949.1 + View
Durio zibethinus Duzib248G0091 NW_019168048.1 - View
Durio zibethinus Duzib052G0521 NW_019167849.1 - View
Durio zibethinus Duzib041G0759 NW_019167826.1 + View
Durio zibethinus Duzib187G0635 NW_019167860.1 + View
Durio zibethinus Duzib093G0081 NW_019167937.1 - View
Erigeron canadensis ECA232G2385 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA246G2950 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.F01614 Chr06 - View
Eucalyptus grandis Eucgr.I02379 Chr09 + View
Eucalyptus grandis Eucgr.I01308 Chr09 - View
Eutrema salsugineum Thhalv10009634m.g PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_5 + View
Eutrema salsugineum Thhalv10019655m.g PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_9 + View
Fragaria x ananassa FAN20G3044 PF05142 - Domain of unknown function (DUF702) (DUF702) Fvb2-3 + View
Fragaria x ananassa FAN20G2535 PF05142 - Domain of unknown function (DUF702) (DUF702) Fvb2-3 - View
Fragaria x ananassa FAN27G2120 PF05142 - Domain of unknown function (DUF702) (DUF702) Fvb2-1 - View
Fragaria x ananassa FAN26G1640 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Fvb1-2 - View
Fragaria vesca FvH4_2g38950 PF05142 - Domain of unknown function (DUF702) (DUF702) Fvb2 + View
Gossypium hirsutum Gohir.A03G197800 PF05142 - Domain of unknown function (DUF702) (DUF702) A03 - View
Gossypium hirsutum Gohir.D02G097000 PF05142 - Domain of unknown function (DUF702) (DUF702) D02 - View
Gossypium hirsutum Gohir.D05G192000 PF05142 - Domain of unknown function (DUF702) (DUF702) D05 + View
Gossypium hirsutum Gohir.D06G002300 PF05142 - Domain of unknown function (DUF702) (DUF702) D06 + View
Gossypium hirsutum Gohir.A13G031350 PF05142 - Domain of unknown function (DUF702) (DUF702) A13 + View
Gossypium hirsutum Gohir.A03G080500 PF05142 - Domain of unknown function (DUF702) (DUF702) A03 - View
Gossypium hirsutum Gohir.D01G099600 PF05142 - Domain of unknown function (DUF702) (DUF702) D01 - View
Gossypium hirsutum Gohir.D13G029350 PF05142 - Domain of unknown function (DUF702) (DUF702) D13 + View
Gossypium hirsutum Gohir.D11G186400 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED D11 - View
Gossypium hirsutum Gohir.A11G178800 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED A11 - View
Gossypium hirsutum Gohir.A05G188900 PF05142 - Domain of unknown function (DUF702) (DUF702) A05 + View
Gossypium hirsutum Gohir.A06G006400 PF05142 - Domain of unknown function (DUF702) (DUF702) A06 + View
Gossypium hirsutum Gohir.A01G113350 PF05142 - Domain of unknown function (DUF702) (DUF702) A01 + View
Gossypium hirsutum Gohir.D02G209800 PF05142 - Domain of unknown function (DUF702) (DUF702) D02 - View
Glycine max Glyma.02G051900 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Gm02 - View
Glycine max Glyma.01G170700 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Gm01 - View
Glycine max Glyma.17G255000 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm17 - View
Glycine max Glyma.12G039100 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm12 + View
Glycine max Glyma.06G027500 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm06 + View
Glycine max Glyma.04G027400 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm04 + View
Glycine max Glyma.04G009300 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm04 - View
Gossypium raimondii Gorai.005G110600 Chr05 - View
Gossypium raimondii Gorai.005G247100 Chr05 - View
Gossypium raimondii Gorai.007G198100 Chr07 - View
Gossypium raimondii Gorai.002G125600 Chr02 + View
Gossypium raimondii Gorai.010G006800 Chr10 + View
Gossypium raimondii Gorai.013G033500 Chr13 + View
Gossypium raimondii Gorai.009G197300 Chr09 + View
Helianthus annuus HanXRQChr09g0269401 Putative protein of unknown function DUF702 HanXRQChr09 - View
Hydrangea macrophylla Hma1.2p1_0066F.1_g035950 Hma1.2p1_0066F.1 + View
Lupinus albus Lalb_Chr23g0266341 PF05142 - Domain of unknown function (DUF702) (DUF702) Lalb_Chr23 + View
Lupinus albus Lalb_Chr11g0062101 PF05142 - Domain of unknown function (DUF702) (DUF702) Lalb_Chr11 + View
Lupinus albus Lalb_Chr14g0369671 PF05142 - Domain of unknown function (DUF702) (DUF702) Lalb_Chr14 - View
Lotus japonicus Lj5g0027236 PF05142 - Domain of unknown function (DUF702) (DUF702) chr5 + View
Lotus japonicus Lj4g0011139 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED chr4 + View
Lotus japonicus Lj1g0023817 PF05142 - Domain of unknown function (DUF702) (DUF702) chr1 + View
Lonicera japonica Lj4A30T28 GWHAAZE00000004 + View
Lonicera japonica Lj4A790T64 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_1_16440 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Lsat_1_v8_lg_1 + View
Lactuca sativa Lsat_1_v5_gn_5_26401 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Lsat_1_v8_lg_5 + View
Malus domestica MD15G1019200 SHI-related sequence 7 Chr15 - View
Malus domestica MD08G1021500 SHI-related sequence 7 Chr08 - View
Malus domestica MD02G1137000 Lateral root primordium (LRP) protein-related Chr02 + View
Manihot esculenta Manes.05G153200 Chromosome05 + View
Manihot esculenta Manes.01G141500 Chromosome01 + View
Manihot esculenta Manes.11G087500 Chromosome11 - View
Manihot esculenta Manes.02G100100 Chromosome02 + View
Manihot esculenta Manes.04G085450 Chromosome04 + View
Manihot esculenta Manes.18G018200 Chromosome18 + View
Medicago truncatula Medtr4g071110 zinc finger, LRP1 type protein chr4 - View
Medicago truncatula Medtr1g023230 zinc finger, LRP1 type protein chr1 - View
Medicago truncatula Medtr3g112510 transcription factor, putative chr3 - View
Nelumbo nucifera Nn5g29169 chr5 - View
Olea europaea Oeu030401.1 chr14 + View
Petunia axillaris Peaxi162Scf00016g00232 Lateral root primordium (LRP) protein-related Peaxi162Scf00016 + View
Punica granatum PGR031G1427 NC_045127.1 + View
Punica granatum PGR119G2466 NC_045132.1 + View
Punica granatum PGR083G1590 NC_045133.1 + View
Punica granatum PGR142G0796 NC_045128.1 + View
Prunus persica Prupe.8G088300 PF05142 - Domain of unknown function (DUF702) (DUF702) Pp08 + View
Prunus persica Prupe.1G371500 PF05142 - Domain of unknown function (DUF702) (DUF702) Pp01 - View
Pisum sativum Psat4g096720 Domain of unknown function (DUF702) chr4LG4 - View
Pisum sativum Psat5g014640 Domain of unknown function (DUF702) chr5LG3 + View
Papaver somniferum PSO541G2701 NC_039363.1 - View
Papaver somniferum PSO675G4425 NC_039358.1 - View
Populus trichocarpa Potri.007G017500 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Chr07 - View
Populus trichocarpa Potri.002G028500 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr02 + View
Populus trichocarpa Potri.004G160600 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr04 - View
Populus trichocarpa Potri.005G234200 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr05 - View
Populus trichocarpa Potri.005G118200 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Chr05 - View
Phaseolus vulgaris Phvul.001G009800 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr01 + View
Phaseolus vulgaris Phvul.011G041200 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr11 + View
Phaseolus vulgaris Phvul.009G013700 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr09 - View
Quercus lobata QL06p034582 6 + View
Quercus lobata QL02p010571 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0302041 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim08G0124000 chr08 - View
Rhododendron simsii Rhsim07G0244300 chr07 - View
Salvia bowleyana SalBow8G3865 GWHASIU00000004 + View
Salvia bowleyana SalBow8G3048 GWHASIU00000004 - View
Salvia bowleyana SalBow7G3053 GWHASIU00000005 - View
Salix brachista Sabra05G0180500 GWHAAZH00000005 - View
Salix brachista Sabra02G0022600 GWHAAZH00000002 + View
Salix brachista Sabra09G0093900 GWHAAZH00000009 - View
Salix brachista Sabra07G0014900 GWHAAZH00000007 - View
Salix brachista Sabra04G0107400 GWHAAZH00000004 - View
Simmondsia chinensis Sc26g0003290 GWHAASQ00000026 + View
Simmondsia chinensis Sc15g0007240 GWHAASQ00000015 - View
Simmondsia chinensis Sc16g0002390 GWHAASQ00000016 + View
Sechium edule Sed0009988 LG01 + View
Sechium edule Sed0011373 LG11 - View
Sechium edule Sed0014670 LG10 - View
Sechium edule Sed0012125 LG14 - View
Sapria himalayana SHI08111 scaffold7_18583372 + View
Solanum lycopersicum Solyc04g080970.4 Protein SHI RELATED SEQUENCE 1 (AHRD V3.3 *** A0A2G3CQY9_CAPCH) SL4.0ch04 - View
Solanum lycopersicum Solyc02g084680.3 Protein SHI RELATED SEQUENCE 5 (AHRD V3.3 *** A0A2G3AAR0_CAPAN),Pfam:PF05142 SL4.0ch02 + View
Schrenkiella parvula Sp1g17600 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED ch1-1 - View
Schrenkiella parvula Sp5g30650 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED ch5-7 - View
Solanum pennellii Sopen02g029350 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) | STYLISH 1 (STY1) | FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus | EXPRESSED IN: 6 plant structures | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related Spenn-ch02 + View
Solanum pennellii Sopen01g052300 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. | SHI-related sequence 5 (SRS5) | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 Spenn-ch01 - View
Solanum pennellii Sopen02g013400 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) | STYLISH 1 (STY1) | FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus | EXPRESSED IN: 6 plant structures | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related Spenn-ch02 + View
Solanum pennellii Sopen04g034580 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) | STYLISH 1 (STY1) | FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus | EXPRESSED IN: 6 plant structures | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400003616 Transcription factor ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400030969 Transcription factor ST4.03ch01 - View
Solanum tuberosum PGSC0003DMG400003761 DNA-binding protein ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400022540 Short internodes 2 ST4.03ch03 + View
Selenicereus undatus Hund26875 Scaffold_2055 + View
Selenicereus undatus Hund16466 Scaffold_33677 - View
Selenicereus undatus Hund17210 Scaffold_33675 - View
Trochodendron aralioides TAR628G0913 group5 - View
Trochodendron aralioides TAR376G0411 group14 - View
Trochodendron aralioides TAR625G1372 group4 + View
Trochodendron aralioides TAR381G1719 group11 + View
Theobroma cacao Thecc.08G036500 SHI-related sequence 7 Chromosome_8 - View
Theobroma cacao Thecc.01G025100 Lateral root primordium protein-related Chromosome_1 - View
Theobroma cacao Thecc.02G078600 Lateral root primordium protein-related Chromosome_2 + View
Trifolium pratense TPR.G12366 Tp57577_TGAC_v2_LG7 + View
Trifolium pratense TPR.G30501 Tp57577_TGAC_v2_LG3 - View
Trifolium pratense TPR.G30480 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI36G0504 NC_052237.1 - View
Tripterygium wilfordii TWI73G0664 NC_052232.1 + View
Tripterygium wilfordii TWI56G1419 NC_052242.1 - View
Vaccinium macrocarpon vmacro17446 Similar to SRS1: Protein SHI RELATED SEQUENCE 1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro04319 Similar to EOT1: Protein EXPRESSION OF TERPENOIDS 1 (Solanum lycopersicum OX%3D4081) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G0839 CM024073.1 + View
Vigna mungo VMungo1309G1130 CM024072.1 - View
Vitis vinifera GSVIVG01018845001 chr4 - View
Vitis vinifera GSVIVG01009812001 chr18 - View