Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G2680 LG-4 - View
Acer truncatum Atru.chr1.4156 chr1 + View
Actinidia chinensis Actinidia21840 Lachesis_group1 - View
Actinidia chinensis Actinidia24424 Lachesis_group27 + View
Arabidopsis lyrata AL2G32000 scaffold_2 - View
Avicennia marina MSTRG.10908 ScioBoG_14204_HRSCAF_14270 - View
Amaranthus hybridus Ah.15g094920 Pumilio homolog 23 (APUM-23) (AtPUM23) AmaHy_arrow1_Scaffold_15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UMP4HF PF00806 - Pumilio-family RNA binding repeat (PUF) arahy.Tifrunner.gnm1.Arahy.16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SXV5N5 K14790 - nucleolar protein 9 (NOP9) arahy.Tifrunner.gnm1.Arahy.06 - View
Arabidopsis thaliana AT1G72320 pumilio 23 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 23 (PUM23)%3B FUNCTIONS IN: RNA binding%2C binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B Has 376 Blast hits to 376 proteins in 171 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 121%3B Fungi - 142%3B Plants - 69%3B Viruses - 0%3B Other Eukaryotes - 44 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB03g14980 ChrB03 - View
Brassica carinata BcaC08g46688 ChrC08 - View
Brassica napus C06p46680 C06 - View
Brassica napus A07p38500 A07 - View
Brassica oleracea BolC6t39713H C6 - View
Brassica rapa BraA07t31410Z A07 - View
Beta vulgaris EL10Ac7g16496 K14790 - nucleolar protein 9 (NOP9) Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0026354 PREDICTED: pumilio homolog 23 isoform X1 [Vitis vinifera] Chr15 + View
Capsicum annuum CAN.G790.55 PGAv.1.6.scaffold790 - View
Cannabis sativa CANSAT56G3801 NC_044371.1 + View
Corylus avellana Haze_16138 Similar to APUM23: Pumilio homolog 23 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc04_g00670 Pumilio homolog 23 chr4 - View
Citrus clementina Ciclev10024928m.g scaffold_7 + View
Carpinus fangiana Cfa003459 Cfa01 - View
Cardamine hirsuta CARHR065220 Nucleolar protein 9 Chr2 - View
Carya illinoinensis CiPaw.02G130800 K14790 - nucleolar protein 9 (NOP9) Chr02 - View
Citrullus lanatus ClCG09G001410 Pumilio domain-containing protein CG_Chr09 + View
Cucumis melo MELO3C024305.2 pumilio homolog 23 chr01 - View
Corchorus olitorius COL.COLO4_30871 hypothetical protein AWUE01020791.1 + View
Carica papaya Cpa.g.sc25.195 supercontig_25 + View
Chenopodium quinoa AUR62025613 APUM23: Pumilio homolog 23 C_Quinoa_Scaffold_1677 - View
Chenopodium quinoa AUR62001402 APUM23: Pumilio homolog 23 C_Quinoa_Scaffold_2716 - View
Capsella rubella Carub.0002s1918 scaffold_2 - View
Cucumis sativus L. CsaV3_7G033920 pumilio homolog 23 chr7 - View
Daucus carota DCAR_007660 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv37817 GWHABJS00000006 + View
Davidia involucrata Dinv20380 GWHABJS00000019 + View
Durio zibethinus Duzib192G0321 NW_019168037.1 - View
Erigeron canadensis ECA234G0243 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.J02595 Chr10 - View
Erythranthe guttata Migut.I01134 scaffold_9 + View
Eutrema salsugineum Thhalv10018182m.g K14790 - nucleolar protein 9 (NOP9) scaffold_9 + View
Fragaria x ananassa FAN14G4637 K14790 - nucleolar protein 9 (NOP9) Fvb6-1 - View
Fragaria x ananassa FAN05G1996 PTHR13102:SF0 - NUCLEOLAR PROTEIN 9 Fvb6-3 - View
Fragaria x ananassa FAN09G3780 K14790 - nucleolar protein 9 (NOP9) Fvb6-2 - View
Fragaria x ananassa FAN02G3526 K14790 - nucleolar protein 9 (NOP9) Fvb6-4 + View
Fragaria vesca FvH4_6g35860 K14790 - nucleolar protein 9 (NOP9) Fvb6 + View
Gossypium hirsutum Gohir.D05G144100 K14790 - nucleolar protein 9 (NOP9) D05 + View
Gossypium hirsutum Gohir.A05G141800 K14790 - nucleolar protein 9 (NOP9) A05 + View
Glycine max Glyma.03G263200 K14790 - nucleolar protein 9 (NOP9) Gm03 - View
Glycine max Glyma.19G262250 PTHR13102 - PROTEIN C14ORF21 Gm19 - View
Gossypium raimondii Gorai.009G148000 Chr09 + View
Hydrangea macrophylla Hma1.2p1_0090F.1_g045800 Hma1.2p1_0090F.1 - View
Lupinus albus Lalb_Chr15g0076691 K14790 - nucleolar protein 9 (NOP9) Lalb_Chr15 - View
Lotus japonicus Lj1g0014309 K14790 - nucleolar protein 9 (NOP9) chr1 - View
Lonicera japonica Lj9C538T8 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_5_137681 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI13_g01657_MAGBIO AED:0.20 Chr13 + View
Malus domestica MD09G1172500 pumilio 23 Chr09 - View
Manihot esculenta Manes.04G151100 Chromosome04 + View
Nicotiana tabacum Nitab4.5_0006338g0060 Pumilio RNA-binding repeat, Armadillo-type fold, Armadillo-like helical Nitab4.5_0006338 + View
Olea europaea Oeu019509.2 chr18 - View
Petunia axillaris Peaxi162Scf00038g02336 pumilio 23 Peaxi162Scf00038 + View
Punica granatum PGR102G3180 NC_045129.1 + View
Populus trichocarpa Potri.003G073000 K14790 - nucleolar protein 9 (NOP9) Chr03 + View
Phaseolus vulgaris Phvul.009G261600 K14790 - nucleolar protein 9 (NOP9) Chr09 - View
Quercus lobata QL05p000862 5 + View
Rhododendron simsii Rhsim08G0245000 chr08 + View
Striga asiatica SGA_v2.0_scaffold122G33306 scaffold122 - View
Salix brachista Sabra01G0130200 GWHAAZH00000001 + View
Salix brachista Sabra03G0043700 GWHAAZH00000003 + View
Sechium edule Sed0028190 LG04 - View
Solanum lycopersicum Solyc03g123640.3 Pumilio-like protein 23 (AHRD V3.3 *** A0A2G2WPL0_CAPBA) SL4.0ch03 + View
Schrenkiella parvula Sp5g27400 K14790 - nucleolar protein 9 (NOP9) ch5-6 - View
Solanum pennellii Sopen03g041410 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 UTR of target mRNA transcripts. | pumilio 23 (PUM23) | FUNCTIONS IN: RNA binding, binding | INVOLVED IN: biological_process unknown | LOCATED IN: nucleolus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat , Armadillo-like helical , Armadillo-type fold Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400009149 APUM23 ST4.03ch03 + View
Selenicereus undatus Hund18636 Scaffold_33675 - View
Trochodendron aralioides TAR624G0006 group9 - View
Theobroma cacao Thecc.06G130500 Pumilio 23 Chromosome_6 + View
Tripterygium wilfordii TWI14G0802 NC_052249.1 - View
Vigna mungo VMungo1309G0067 CM024072.1 + View
Vitis vinifera GSVIVG01016664001 chr9 - View