Gene: Solyc03g123640.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc03g123640.3
- Transcript Identifier Solyc03g123640.3.1
- Gene Type Coding gene
- Location SL4.0ch03 : 64890566-64897481 : positive
Gene Family Information
- ID HOM05D005942
- #Genes/#Species 132/98
- Phylogenetic origin
- ID ORTHO05D007209
- #Genes/#Species 133/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc03g123640.3.1
- uniprot A0A3Q7FWC0
- gene_id Solyc03g123640
Descriptions
- Description Pumilio-like protein 23 (AHRD V3.3 *** A0A2G2WPL0_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006417 | IEA | GOA Database | regulation of translation | |
| GO:0000480 | IBA | GOA Database | endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | |
| GO:0000472 | IBA | GOA Database | endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | |
| GO:0000447 | IBA | GOA Database | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | |
| GO:0000056 | IBA | GOA Database | ribosomal small subunit export from nucleus | |
| GO:0009749 | ISO | PLAZA Integrative Orthology | response to glucose | AT1G72320 |
| GO:0010252 | ISO | PLAZA Integrative Orthology | auxin homeostasis | AT1G72320 |
| GO:0009744 | ISO | PLAZA Integrative Orthology | response to sucrose | AT1G72320 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IBA IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005730 | IBA | GOA Database | nucleolus | |
| GO:0030686 | IBA | GOA Database | 90S preribosome | |
| GO:0030688 | IBA | GOA Database | preribosome, small subunit precursor |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.1.3 | Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA processing factor (APUM23) |