Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Potri.013G058400 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Chr13 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G14500 LG-5 - View
Aethionema arabicum Aa31LG11G11430 LG-11 + View
Actinidia chinensis Actinidia30553 Lachesis_group10 - View
Actinidia chinensis Actinidia22083 Lachesis_group15 + View
Arabidopsis lyrata AL6G29380 scaffold_6 - View
Arabidopsis lyrata AL3G13810 scaffold_3 - View
Avicennia marina MSTRG.19934 ScioBoG_25048_HRSCAF_25167 + View
Amaranthus hybridus Ah.13g075350 Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 AmaHy_arrow1_Scaffold_13 - View
Aquilegia oxysepala Aqoxy1G00486 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JDMG7B K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PLSY77 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein H/ACA ribonucleoprotein complex%2C subunit Gar1/Naf1 protein%3B FUNCTIONS IN: snoRNA binding%2C pseudouridine synthase activity%2C RNA binding%3B LOCATED IN: chloroplast thylakoid membrane%2C membrane%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C 4 anthesis%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex%2C subunit Gar1%2C eukaryote (InterPro:IPR021154)%2C H/ACA ribonucleoprotein complex%2C subunit Gar1/Naf1 (InterPro:IPR007504)%3B BEST Arabidopsis thaliana protein match is: H/ACA ribonucleoprotein complex%2C subunit Gar1/Naf1 protein (TAIR:AT3G03920.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein H/ACA ribonucleoprotein complex%2C subunit Gar1/Naf1 protein%3B FUNCTIONS IN: snoRNA binding%2C pseudouridine synthase activity%2C RNA binding%3B LOCATED IN: chloroplast thylakoid membrane%2C nucleolus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex%2C subunit Gar1%2C eukaryote (InterPro:IPR021154)%2C H/ACA ribonucleoprotein complex%2C subunit Gar1/Naf1 (InterPro:IPR007504)%3B BEST Arabidopsis thaliana protein match is: H/ACA ribonucleoprotein complex%2C subunit Gar1/Naf1 protein (TAIR:AT5G18180.1)%3B Has 27180 Blast hits to 8695 proteins in 812 species: Archae - 17%3B Bacteria - 4971%3B Metazoa - 11125%3B Fungi - 2086%3B Plants - 5744%3B Viruses - 428%3B Other Eukaryotes - 2809 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0697G007 AmTr_v1.0_scaffold00004 - View
Brassica carinata BcaB01g05179 ChrB01 - View
Brassica carinata BcaB08g36698 ChrB08 + View
Brassica napus BNapus_Darmor_BZH_scaffold_78p00440 BNapus_Darmor_BZH_scaffold_78 - View
Brassica napus A01p41270 A01 + View
Brassica napus C09p58800 C09 + View
Brassica napus C02p09730 C02 - View
Brassica napus A02p04770 A02 - View
Brassica napus A03p08690 A03 - View
Brassica oleracea BolC1t05799H C1 + View
Brassica oleracea BolC9t58722H C9 + View
Brassica oleracea BolC2t06882H C2 - View
Brassica oleracea BolC3t13499H C3 - View
Brassica rapa BraA01t04550Z A01 + View
Brassica rapa BraA02t05436Z A02 - View
Beta vulgaris EL10Ac3g06820 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Chr3_EL10_PGA_scaffold7 + View
Camellia sinensis var. sinensis CSS0045523 PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like protein 1-like [Setaria italica] Chr10 - View
Cannabis sativa CANSAT78G0749 NC_044376.1 + View
Cicer arietinum L. Ca_08267_v3 Ca_LG3_v3 - View
Corylus avellana Haze_19418 Similar to At3g03920: Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 (Arabidopsis thaliana OX%3D3702) 10 + View
Coffea canephora Cc06_g22960 Hypothetical protein chr6 + View
Carpinus fangiana Cfa016441 Cfa07 + View
Cardamine hirsuta CARHR078040 H/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed Chr3 - View
Cardamine hirsuta CARHR194880 H/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed Chr6 + View
Carya illinoinensis CiPaw.09G001900 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Chr09 + View
Citrullus lanatus ClCG04G005310 H/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed CG_Chr04 + View
Cucumis melo MELO3C008801.2 H/ACA ribonucleoprotein complex subunit chr08 - View
Corchorus olitorius COL.COLO4_13597 H/ACA ribonucleoprotein complex%2C subunit Gar1/Naf1 AWUE01015209.1 - View
Carica papaya Cpa.g.sc51.114 supercontig_51 + View
Chenopodium quinoa AUR62032690 At3g03920: Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 C_Quinoa_Scaffold_3654 + View
Capsella rubella Carub.0006s1646 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) scaffold_6 - View
Capsella rubella Carub.0003s0316 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) scaffold_3 - View
Cucumis sativus L. CsaV3_4G013280 H/ACA ribonucleoprotein complex subunit chr4 - View
Davidia involucrata Dinv37014 GWHABJS00000021 - View
Davidia involucrata Dinv14579 GWHABJS00000015 + View
Durio zibethinus Duzib106G1401 NW_019168492.1 - View
Durio zibethinus Duzib177G0709 NW_019168004.1 + View
Erythranthe guttata Migut.J01888 scaffold_10 + View
Eutrema salsugineum Thhalv10021561m.g K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) scaffold_13 + View
Eutrema salsugineum Thhalv10014755m.g K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) scaffold_2 - View
Gossypium hirsutum Gohir.A08G213200 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) A08 - View
Gossypium hirsutum Gohir.D08G230300 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) D08 - View
Glycine max Glyma.16G041400 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Gm16 - View
Glycine max Glyma.19G110900 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Gm19 + View
Lupinus albus Lalb_Chr22g0359191 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Lalb_Chr22 - View
Lupinus albus Lalb_Chr14g0364491 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Lalb_Chr14 - View
Lotus japonicus Lj1g0021266 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) chr1 - View
Manihot esculenta Manes.08G144000 Chromosome08 + View
Manihot esculenta Manes.09G141400 Chromosome09 + View
Medicago truncatula Medtr7g085640 Gar1/Naf1 RNA-binding region protein chr7 - View
Nelumbo nucifera Nn7g35851 chr7 + View
Nicotiana tabacum Nitab4.5_0002769g0090 Translation protein, beta-barrel domain, H/ACA ribonucleoprotein complex, subunit Gar1/Naf1, H/ACA ribonucleoprotein complex, subunit Gar1, eukaryote Nitab4.5_0002769 - View
Petunia axillaris Peaxi162Scf00076g01048 H/ACA ribonucleoprotein complex subunit 1-like protein 2 Peaxi162Scf00076 + View
Petunia axillaris Peaxi162Scf00003g04832 Peaxi162Scf00003 - View
Punica granatum PGR142G1491 NC_045128.1 - View
Papaver somniferum PSO339G5713 NC_039366.1 - View
Papaver somniferum PSO384G0229 NC_039368.1 - View
Phaseolus vulgaris Phvul.001G110400 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Chr01 + View
Quercus lobata QL07p019530 7 - View
Rhododendron simsii Rhsim04G0087500 chr04 + View
Salix brachista Sabra13G0051900 GWHAAZH00000013 - View
Salix brachista Sabra19G0042500 GWHAAZH00000019 + View
Solanum lycopersicum Solyc10g078540.3 H/ACA ribonucleoprotein complex subunit (AHRD V3.3 *-* A0A2G3BI53_CAPCH) SL4.0ch10 + View
Schrenkiella parvula Sp6g26140 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) ch6-6 + View
Schrenkiella parvula Sp3g02890 K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) ch3-1 - View
Solanum pennellii Sopen10g029190 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein | FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity, RNA binding | LOCATED IN: chloroplast thylakoid membrane, nucleolus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1, eukaryote , H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 | BEST Arabidopsis thaliana protein match is: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein Spenn-ch10 + View
Solanum tuberosum PGSC0003DMG400008366 H/ACA ribonucleoprotein complex subunit ST4.03ch10 - View
Selenicereus undatus Hund24835 Scaffold_3410 - View
Selenicereus undatus Hund19236 Scaffold_33673 - View
Trochodendron aralioides TAR369G0512 group18 - View
Theobroma cacao Thecc.05G294500 H/ACA ribonucleoprotein complex subunit 1-like protein 1 Chromosome_5 + View
Tarenaya hassleriana THA.LOC104827273 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104802867 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 NW_010970490.1 + View
Trifolium pratense TPR.G5895 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI34G0161 NC_052235.1 - View
Tripterygium wilfordii TWI32G1207 NC_052254.1 + View
Vaccinium macrocarpon vmacro09141 Similar to At3g03920: Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G2477 CM024070.1 + View
Vitis vinifera GSVIVG01033401001 chr8 - View