Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Lj1A691T57 GWHAAZE00000001 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G21960 LG-2 + View
Acer truncatum Atru.chr6.2873 chr6 + View
Actinidia chinensis Actinidia39328 Lachesis_group9 + View
Actinidia chinensis Actinidia30457 Lachesis_group15 - View
Actinidia chinensis Actinidia11105 Lachesis_group5 + View
Arabidopsis lyrata AL3G53630 scaffold_3 + View
Arabidopsis lyrata AL7G24090 scaffold_7 + View
Avicennia marina MSTRG.15130 ScioBoG_19538_HRSCAF_19626 + View
Amaranthus hybridus Ah.01g015420 AmaHy_arrow1_Scaffold_1 + View
Amaranthus hybridus Ah.01g004040 26S proteasome non-ATPase regulatory subunit 2 homolog A (26S proteasome regulatory subunit RPN1a) (AtRPN1a) (26S proteasome regulatory subunit S2 homolog A) AmaHy_arrow1_Scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ULM3VA K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WEN01S K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT2G20580 26S proteasome regulatory subunit S2 1A encoding the RPN subunits of the 26S proteasome 26S proteasome regulatory subunit S2 1A (RPN1A)%3B FUNCTIONS IN: enzyme regulator activity%2C binding%3B INVOLVED IN: regulation of cell cycle%2C protein catabolic process%2C ubiquitin-dependent protein catabolic process%3B LOCATED IN: proteasome regulatory particle%2C base subcomplex%2C proteasome complex%2C nucleus%2C plasma membrane%3B EXPRESSED IN: 28 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn1 subunit (InterPro:IPR016643)%2C Armadillo-type fold (InterPro:IPR016024)%2C Proteasome/cyclosome%2C regulatory subunit (InterPro:IPR002015)%3B BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B (TAIR:AT4G28470.1)%3B Has 1002 Blast hits to 968 proteins in 295 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 376%3B Fungi - 294%3B Plants - 141%3B Viruses - 0%3B Other Eukaryotes - 187 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT4G28470 26S proteasome regulatory subunit S2 1B encoding the RPN subunits of the 26S proteasome 26S proteasome regulatory subunit S2 1B (RPN1B)%3B FUNCTIONS IN: enzyme regulator activity%2C binding%3B INVOLVED IN: protein catabolic process%3B LOCATED IN: proteasome regulatory particle%2C base subcomplex%2C proteasome complex%3B EXPRESSED IN: 6 plant structures%3B CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn1 subunit (InterPro:IPR016643)%2C Proteasome/cyclosome%2C regulatory subunit (InterPro:IPR002015)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1A (TAIR:AT2G20580.1)%3B Has 1017 Blast hits to 967 proteins in 297 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 372%3B Fungi - 296%3B Plants - 141%3B Viruses - 0%3B Other Eukaryotes - 198 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC06g32618 ChrC06 + View
Brassica carinata BcaB03g16854 ChrB03 + View
Brassica carinata BcaC06g36750 ChrC06 + View
Brassica carinata BcaB03g12574 ChrB03 - View
Brassica carinata BcaC09g51648 ChrC09 - View
Brassica carinata BcaC07g38333 ChrC07 - View
Brassica carinata BcaNung01564 Contig531 + View
Brassica napus C08p10870 C08 - View
Brassica napus C01p11030 C01 + View
Brassica napus C07p56240 C07 - View
Brassica napus C07p00430 C07 - View
Brassica napus A03p58120 A03 - View
Brassica napus A08p20050 A08 + View
Brassica napus A07p00160 A07 - View
Brassica napus A01p09480 A01 + View
Brassica oleracea BolC7t40489H C7 - View
Brassica oleracea BolC1t01065H C1 + View
Brassica rapa BraA07t27810Z A07 - View
Brassica rapa BraA08t33964Z A08 + View
Brassica rapa BraA01t00890Z A01 + View
Brassica rapa BraA03t14878Z A03 - View
Beta vulgaris EL10Ac9g20812 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0001743 hypothetical protein PRUPE_ppa001162mg [Prunus persica] Chr7 - View
Camellia sinensis var. sinensis CSS0036482 hypothetical protein PRUPE_ppa001162mg [Prunus persica] Chr5 - View
Capsicum annuum CAN.G209.5 PGAv.1.6.scaffold209 + View
Capsicum annuum CAN.G782.27 PGAv.1.6.scaffold782 + View
Cannabis sativa CANSAT64G2461 NC_044379.1 - View
Cicer arietinum L. Ca_18922_v3 Ca_LG6_v3 + View
Coffea canephora Cc05_g07690 26S proteasome non-ATPase regulatory subunit 2 1A chr5 - View
Citrus clementina Ciclev10014210m.g scaffold_2 - View
Cardamine hirsuta CARHR236240 26S proteasome regulatory subunit S2 1B Chr7 - View
Cardamine hirsuta CARHR111150 26S proteasome regulatory subunit S2 1A Chr3 + View
Carya illinoinensis CiPaw.03G181100 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Chr03 - View
Carya illinoinensis CiPaw.04G128800 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Chr04 - View
Citrullus lanatus ClCG02G002360 26S proteasome non-ATPase regulatory subunit CG_Chr02 + View
Cucumis melo MELO3C018868.2 26S proteasome non-ATPase regulatory subunit 2 homolog A chr01 + View
Capsella rubella Carub.0003s3506 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) scaffold_3 + View
Capsella rubella Carub.0007s1223 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) scaffold_7 + View
Cucumis sativus L. CsaV3_7G003090 26S proteasome non-ATPase regulatory subunit 2 homolog chr7 - View
Daucus carota DCAR_021262 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv06862 GWHABJS00000013 - View
Davidia involucrata Dinv10166 GWHABJS00000001 + View
Durio zibethinus Duzib052G0792 NW_019167849.1 + View
Durio zibethinus Duzib248G0284 NW_019168048.1 + View
Eucalyptus grandis Eucgr.K01053 Chr11 - View
Eutrema salsugineum Thhalv10001903m.g K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) scaffold_12 + View
Eutrema salsugineum Thhalv10024363m.g K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) scaffold_1 + View
Fragaria x ananassa FAN14G5439 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Fvb6-1 - View
Fragaria x ananassa FAN02G3233 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Fvb6-4 + View
Fragaria x ananassa FAN05G4358 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Fvb6-3 - View
Fragaria x ananassa FAN09G0797 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Fvb6-2 - View
Gossypium hirsutum Gohir.D01G018000 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) D01 - View
Gossypium hirsutum Gohir.A12G139150 PTHR10943:SF1 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2 A12 - View
Gossypium hirsutum Gohir.A01G019500 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) A01 - View
Glycine max Glyma.12G117600 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Gm12 - View
Glycine max Glyma.06G289400 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Gm06 + View
Gossypium raimondii Gorai.002G020200 Chr02 - View
Lupinus albus Lalb_Chr19g0135111 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Lalb_Chr19 + View
Lupinus albus Lalb_Chr01g0005091 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Lalb_Chr01 + View
Lupinus albus Lalb_Chr03g0029631 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Lalb_Chr03 - View
Lotus japonicus Lj3g0005030 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) chr3 - View
Malus domestica MD09G1242100 26S proteasome regulatory subunit S2 1A Chr09 + View
Malus domestica MD17G1234500 26S proteasome regulatory subunit S2 1A Chr17 + View
Manihot esculenta Manes.13G142400 Chromosome13 + View
Manihot esculenta Manes.12G089500 Chromosome12 - View
Medicago truncatula Medtr4g078780 26S proteasome regulatory subunit S2 1B chr4 - View
Nicotiana tabacum Nitab4.5_0002773g0020 Proteasome/cyclosome repeat, Armadillo-like helical, 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit, Armadillo-type fold Nitab4.5_0002773 - View
Nicotiana tabacum Nitab4.5_0006815g0020 Armadillo-like helical, 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit, Proteasome/cyclosome repeat, Armadillo-type fold Nitab4.5_0006815 + View
Olea europaea Oeu036078.1 chr6 + View
Petunia axillaris Peaxi162Scf00845g00118 26S proteasome non-ATPase regulatory subunit 2 homolog A Peaxi162Scf00845 + View
Petunia axillaris Peaxi162Scf00059g00918 26S proteasome regulatory subunit S2 1A Peaxi162Scf00059 + View
Punica granatum PGR142G0833 NC_045128.1 + View
Prunus persica Prupe.3G134800 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Pp03 - View
Populus trichocarpa Potri.017G014800 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Chr17 - View
Populus trichocarpa Potri.007G137200 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Chr07 + View
Phaseolus vulgaris Phvul.011G115260 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Chr11 + View
Quercus lobata QL08p040017 8 - View
Rosa chinensis RcHm_v2.0_Chr2g0127201 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim06G0137300 chr06 + View
Striga asiatica SGA_v2.0_scaffold34G13924 scaffold34 + View
Striga asiatica SGA_v2.0_scaffold70G23495 scaffold70 + View
Salvia bowleyana SalBow7G1304 GWHASIU00000005 - View
Salix brachista Sabra17G0012000 GWHAAZH00000017 - View
Salix brachista Sabra07G0110300 GWHAAZH00000007 + View
Sechium edule Sed0014471 LG04 - View
Sechium edule Sed0000760 LG05 + View
Solanum lycopersicum Solyc07g053650.4 26S proteasome non-ATPase regulatory subunit 2 homolog (AHRD V3.3 *** A0A2G2Z400_CAPAN) SL4.0ch07 + View
Solanum lycopersicum Solyc10g008180.2 26S proteasome non-ATPase regulatory subunit 2 homolog (AHRD V3.3 *** A0A2G2VRP9_CAPBA) SL4.0ch10 + View
Schrenkiella parvula Sp7g26440 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) ch7-5 - View
Schrenkiella parvula Sp3g33820 K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) ch3-6 + View
Solanum pennellii Sopen07g027620 encoding the RPN subunits of the 26S proteasome | 26S proteasome regulatory subunit S2 1A (RPN1A) | FUNCTIONS IN: enzyme regulator activity, binding | INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process | LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane | EXPRESSED IN: 28 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit , Armadillo-type fold , Proteasome/cyclosome, regulatory subunit | BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B Spenn-ch07 + View
Solanum pennellii Sopen10g004040 encoding the RPN subunits of the 26S proteasome | 26S proteasome regulatory subunit S2 1A (RPN1A) | FUNCTIONS IN: enzyme regulator activity, binding | INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process | LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane | EXPRESSED IN: 28 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit , Armadillo-type fold , Proteasome/cyclosome, regulatory subunit | BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B Spenn-ch10 + View
Solanum tuberosum PGSC0003DMG400021858 26S proteasome regulatory subunit rpn1 ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG402009395 26S proteasome regulatory subunit rpn1 ST4.03ch07 - View
Theobroma cacao Thecc.02G185600 26S proteasome regulatory subunit S2 1A Chromosome_2 - View
Tarenaya hassleriana THA.LOC104824690 26S proteasome non-ATPase regulatory subunit 2 homolog A-like NW_010966933.1 + View
Tarenaya hassleriana THA.LOC104804050 26S proteasome non-ATPase regulatory subunit 2 homolog A NW_010971389.1 + View
Tripterygium wilfordii TWI23G0418 NC_052239.1 + View
Tripterygium wilfordii TWI14G1271 NC_052249.1 - View
Vigna mungo VMungo1127G1900 CM024076.1 - View
Vitis vinifera GSVIVG01020602001 chr12 + View