Gene: Solyc10g008180.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g008180.2
  • Transcript Identifier Solyc10g008180.2.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 2182903-2189409 : positive

Gene Family Information

  • ID HOM05D002292
  • #Genes/#Species 295/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g008180.2.1
  • uniprot A0A3Q7IC61
  • gene_id Solyc10g008180

Descriptions

  • Description 26S proteasome non-ATPase regulatory subunit 2 homolog (AHRD V3.3 *** A0A2G2VRP9_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT2G20580
GO:0051726
ISO
PLAZA Integrative Orthologyregulation of cell cycle AT2G20580
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT2G20580
GO:0045087
ISO
PLAZA Integrative Orthologyinnate immune response AT2G20580
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0043161
IBA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042176
IEA
GOA Databaseregulation of protein catabolic process
GO:0030163
IEA
GOA Databaseprotein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G20580
GO:0043130
ISO
PLAZA Integrative Orthologyubiquitin binding AT2G20580
GO:0030234
IEA
GOA Databaseenzyme regulator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G20580
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G20580
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G20580
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G20580
GO:0005634
IBA
GOA Databasenucleus
GO:0034515
IBA
GOA Databaseproteasome storage granule
GO:0008540
IBA
IEA
GOA Databaseproteasome regulatory particle, base subcomplex
GO:0000502
IEA
GOA Databaseproteasome complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR040892 RPN1, N-terminal
IPR002015 Proteasome/cyclosome repeat
IPR041433 26S proteasome non-ATPase regulatory subunit RPN1, C-terminal
IPR011989 Armadillo-like helical
Mapman id Description
19.2.5.2.2.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN1