Gene: Thhalv10001903m.g

General Information

Structural Information

  • Species Eutrema salsugineum
  • Gene Identifier Thhalv10001903m.g
  • Transcript Identifier Thhalv10001903m
  • Gene Type Coding gene
  • Location scaffold_12 : 10734744-10740569 : positive

Gene Family Information

  • ID HOM05D002292
  • #Genes/#Species 295/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thhalv10001903m.g.v1.0
  • pacid 20200703

Descriptions

  • Description K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042176
IEA
InterProregulation of protein catabolic process
GO:0030163
ISO
PLAZA Integrative Orthologyprotein catabolic process AT2G20580
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT2G20580
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT2G20580
GO:0045087
ISO
PLAZA Integrative Orthologyinnate immune response AT2G20580
GO:0051726
ISO
PLAZA Integrative Orthologyregulation of cell cycle AT2G20580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030234
IEA
InterProenzyme regulator activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G20580
GO:0043130
ISO
PLAZA Integrative Orthologyubiquitin binding AT2G20580

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000502
IEA
InterProproteasome complex
GO:0008540
ISO
PLAZA Integrative Orthologyproteasome regulatory particle, base subcomplex AT2G20580
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G20580
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G20580
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G20580
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G20580
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G20580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040892 RPN1, N-terminal
IPR011989 Armadillo-like helical
IPR016643 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit
IPR002015 Proteasome/cyclosome repeat
IPR041433 26S proteasome non-ATPase regulatory subunit RPN1, C-terminal
IPR016024 Armadillo-type fold
Mapman id Description
19.2.5.2.2.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN1