Gene: Sabra07G0110300

General Information

Structural Information

  • Species Salix brachista
  • Gene Identifier Sabra07G0110300
  • Transcript Identifier Sabra07G0110300.1
  • Gene Type Coding gene
  • Location GWHAAZH00000007 : 12422487-12437059 : positive

Gene Family Information

  • ID HOM05D002292
  • #Genes/#Species 295/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sabra07G0110300.1
  • Accession GWHGAAZH012548
  • Accession GWHTAAZH012548

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030163
ISO
PLAZA Integrative Orthologyprotein catabolic process AT4G28470
GO:0042176
ISO
PLAZA Homology (enrichment)regulation of protein catabolic process HOM05D002292
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT2G20580
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT2G20580
GO:0045087
ISO
PLAZA Integrative Orthologyinnate immune response AT2G20580
GO:0051726
ISO
PLAZA Integrative Orthologyregulation of cell cycle AT2G20580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0043130
ISO
PLAZA Integrative Orthologyubiquitin binding AT2G20580
GO:0030234
ISO
PLAZA Homology (enrichment)enzyme regulator activity HOM05D002292

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008540
ISO
PLAZA Integrative Orthologyproteasome regulatory particle, base subcomplex AT4G28470
GO:0000502
ISO
PLAZA Integrative Orthologyproteasome complex AT4G28470
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G20580
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G20580
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G20580
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G20580
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G20580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR007287 Sof1-like protein
IPR011989 Armadillo-like helical
IPR001680 WD40 repeat
IPR041433 26S proteasome non-ATPase regulatory subunit RPN1, C-terminal
IPR020472 G-protein beta WD-40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR040892 RPN1, N-terminal
IPR016024 Armadillo-type fold
Mapman id Description
17.1.3.2.1.7 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (Sof1)
19.2.5.2.2.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN1