Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
HanXRQCPg0580161 Putative DNA-directed RNA polymerase, alpha subunit HanXRQCP - View
HanXRQChr01g0020201 Putative ribosomal protein L14b/L23e; Ribosomal protein L14 domain HanXRQChr01 + View
HanXRQChr12g0369841 Putative ribosomal protein S11; DNA-directed RNA polymerase, RBP11-like dimerisation domain HanXRQChr12 - View
HanXRQChr04g0127471 Putative ribosomal protein L14b/L23e; Ribosomal protein L14 domain HanXRQChr04 + View
HanXRQChr11g0326941 Putative DNA-directed RNA polymerase, alpha subunit HanXRQChr11 - View
HanXRQChr00c0593g0576341 Probable DNA-directed RNA polymerase subunit alpha HanXRQChr00c0593 - View
HanXRQChr10g0318041 Putative ribosomal protein L14b/L23e; Ribosomal protein L14 domain HanXRQChr10 + View
HanXRQChr10g0284361 Putative DNA-directed RNA polymerase, alpha subunit HanXRQChr10 - View
HanXRQChr05g0152561 Putative ribosomal protein L14b/L23e; Ribosomal protein L14 domain HanXRQChr05 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL2G21700 scaffold_2 - View
Arabidopsis lyrata AL2G20550 scaffold_2 + View
Amaranthus hybridus Ah.10g027200 30S ribosomal protein S11, chloroplastic (Chloroplastic small ribosomal subunit protein uS11c) AmaHy_arrow1_Scaffold_10 - View
Amaranthus hybridus Ah.10g028970 AmaHy_arrow1_Scaffold_10 - View
Arabidopsis thaliana ATCG00740 RNA polymerase subunit alpha RNA polymerase alpha subunit RNA polymerase subunit alpha (RPOA)%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%3B INVOLVED IN: RNA elongation%3B LOCATED IN: chloroplast%2C nucleoid%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase%2C insert domain (InterPro:IPR011262)%2C DNA-directed RNA polymerase%2C alpha subunit (InterPro:IPR011773)%2C RNA polymerase%2C alpha subunit%2C C-terminal (InterPro:IPR011260)%2C DNA-directed RNA polymerase%2C dimerisation (InterPro:IPR011261)%2C DNA-directed RNA polymerase%2C RpoA/D/Rpb3-type (InterPro:IPR011263)%2C DNA-directed RNA polymerase%2C RBP11-like (InterPro:IPR009025). ChrC - View
Brassica napus BNapus_Darmor_BZH_scaffold_253p00330 BNapus_Darmor_BZH_scaffold_253 - View
Brassica oleracea BolC7t41710H C7 + View
Brassica oleracea BolSC47t61077H Boleracea_scaffold_47 + View
Brassica oleracea BolSC56t61247H Boleracea_scaffold_56 + View
Brassica oleracea BolSC29t60526H Boleracea_scaffold_29 - View
Brassica oleracea BolSC49t61162H Boleracea_scaffold_49 + View
Brassica oleracea BolSC35t60728H Boleracea_scaffold_35 + View
Brassica oleracea BolSC29t60607H Boleracea_scaffold_29 - View
Brassica oleracea BolSC35t60667H Boleracea_scaffold_35 - View
Brassica rapa BraSC103t45482Z Brapa_scaffold_103 - View
Brassica rapa BraSC143t45635Z Brapa_scaffold_143 - View
Brassica rapa BraSC58t46439Z Brapa_scaffold_58 - View
Brassica rapa BraA06t25382Z A06 - View
Cardamine hirsuta CARHR282230 DNA-directed RNA polymerase subunit alpha ChrC - View
Daucus carota DCAR_032517 RNA polymerase alpha subunit DCARv2_PT - View
Erythranthe guttata Migut.D01330 scaffold_4 + View
Gossypium hirsutum Gohir.1Z050034 K02874 - large subunit ribosomal protein L14 (RP-L14, MRPL14, rplN) scaffold_747 + View
Gossypium hirsutum Gohir.D01G102099 K03040 - DNA-directed RNA polymerase subunit alpha (rpoA) D01 - View
Lupinus albus Lalb_Chr23g0274231 PF00411 - Ribosomal protein S11 (Ribosomal_S11) Lalb_Chr23 - View
Lotus japonicus LjContig00318g0022290 K03040 - DNA-directed RNA polymerase subunit alpha (rpoA) Contig00318 - View
Lonicera japonica Lj2C1239T1 GWHAAZE00000002 + View
Lonicera japonica Lj2P1237T122 GWHAAZE00000002 - View
Medicago truncatula Medtr4g051380 DNA-directed RNA polymerase subunit alpha chr4 - View
Medicago truncatula Medtr0002s0760 DNA-directed RNA polymerase subunit alpha scaffold0002 - View
Nelumbo nucifera Nn070s42369 scaffold070 - View
Olea europaea Oeu054719.1 chr14 - View
Punica granatum PGR111G0002 NC_035240.1 - View
Papaver somniferum PSO548G0113 NC_029434.1 - View
Rosa chinensis RcHm_v2.0_Chr2g0118581 RcHm_v2.0_Chr2 + View
Salvia bowleyana SalBow1G3145 GWHASIU00000001 + View
Sechium edule Sed0026352 LG13 + View
Sechium edule Sed0000903 Contig00297 - View
Sechium edule Sed0021757 Contig00297 + View
Solanum lycopersicum Solyc00g500029.1 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *** I6N946_DATST) SL4.0ch00 - View
Solanum lycopersicum Solyc09g050062.1 DNA-directed RNA polymerase subunit alpha (AHRD V3.3 *** I6N988_DATST) SL4.0ch09 - View
Solanum lycopersicum Solyc00g500155.1 50S ribosomal protein L14, chloroplastic (AHRD V3.3 *** I6N992_DATST) SL4.0ch00 + View
Solanum lycopersicum Solyc12g035860.1 30S ribosomal protein S11, chloroplastic (AHRD V3.3 *** G9FCH9_9LAMI) SL4.0ch12 + View
Solanum lycopersicum Solyc00g500074.1 DNA-directed RNA polymerase subunit alpha (AHRD V3.3 *-* A0A1U8QD90_CAPAN) SL4.0ch00 - View
Selaginella moellendorffii SMO086G0025 scaffold_175 - View
Selenicereus undatus Hund08801 Scaffold_33676 + View
Selenicereus undatus Hund29681 Scaffold_186 - View
Selenicereus undatus Hund29035 Scaffold_17839 - View
Selenicereus undatus Hund28758 Scaffold_16694 - View