Gene: Solyc12g035860.1
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g035860.1
- Transcript Identifier Solyc12g035860.1.1
- Gene Type Coding gene
- Location SL4.0ch12 : 43196058-43196372 : positive
Gene Family Information
- ID HOM05D000964
- #Genes/#Species 620/77
- Phylogenetic origin
- ID ORTHO05D003870
- #Genes/#Species 201/57
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc12g035860.1.1
- uniprot A0A3Q7J7M0
- gene_id Solyc12g035860
Descriptions
- Description 30S ribosomal protein S11, chloroplastic (AHRD V3.3 *** G9FCH9_9LAMI)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000462 | IBA | GOA Database | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | |
| GO:0000028 | IBA | GOA Database | ribosomal small subunit assembly | |
| GO:0006412 | IBA IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00750 |
| GO:0003735 | IBA IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0048027 | IBA | GOA Database | mRNA 5'-UTR binding | |
| GO:0070181 | IBA | GOA Database | small ribosomal subunit rRNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005763 | IBA | GOA Database | mitochondrial small ribosomal subunit | |
| GO:0000312 | ISO | PLAZA Integrative Orthology | plastid small ribosomal subunit | ATCG00750 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00750 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | ATCG00750 |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |