Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G1330 LG-8 + View
Aethionema arabicum Aa31LG7G2310 LG-7 + View
Aethionema arabicum Aa31LG10G1320 LG-10 + View
Acer truncatum Atru.chr1.4072 chr1 + View
Actinidia chinensis Actinidia31166 Lachesis_group9 - View
Actinidia chinensis Actinidia26015 Lachesis_group2 - View
Actinidia chinensis Actinidia32204 Lachesis_group27 + View
Arabidopsis lyrata AL3G26330 scaffold_3 + View
Arabidopsis lyrata AL1G29640 scaffold_1 - View
Avicennia marina MSTRG.10932 ScioBoG_14204_HRSCAF_14270 - View
Avicennia marina MSTRG.26483 ScioBoG_52287_HRSCAF_52434 + View
Avicennia marina MSTRG.22535 ScioBoG_3703_HRSCAF_3719 - View
Arabidopsis thaliana AT3G14100 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: mRNA 3'-UTR binding%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: oligouridylate-binding protein 1A (TAIR:AT1G54080.1)%3B Has 33134 Blast hits to 32894 proteins in 1695 species: Archae - 47%3B Bacteria - 3311%3B Metazoa - 12038%3B Fungi - 6892%3B Plants - 9686%3B Viruses - 3%3B Other Eukaryotes - 1157 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT1G17370 oligouridylate binding protein 1B Encodes an RNA%E2%80%93binding protein involved in stress granule formation. Regulated by a transposable element small RNA. oligouridylate binding protein 1B (UBP1B)%3B FUNCTIONS IN: mRNA 3'-UTR binding%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1)%3B Has 681 Blast hits to 681 proteins in 21 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 681%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 - View
Brassica napus C08p43900 C08 + View
Brassica napus A09p60420 A09 + View
Brassica oleracea BolC8t51938H C8 + View
Brassica rapa BraA09t41413Z A09 + View
Beta vulgaris EL10Ac7g16442 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0021380 hypothetical protein PRUPE_ppa006170mg [Prunus persica] Chr15 - View
Cannabis sativa CANSAT56G1860 NC_044371.1 + View
Cicer arietinum L. Ca_23408_v3 Ca_LG7_v3 + View
Corylus avellana Haze_16064 Similar to UBP1B: Oligouridylate-binding protein 1B (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc04_g01060 RNA-binding (RRM/RBD/RNP motifs) family protein chr4 - View
Citrus clementina Ciclev10025673m.g scaffold_7 + View
Cardamine hirsuta CARHR088960 RNA-binding protein Chr3 + View
Cardamine hirsuta CARHR044410 RNA-binding protein Chr1 - View
Cardamine hirsuta CARHR017970 RNA-binding protein Chr1 - View
Carya illinoinensis CiPaw.02G133800 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Chr02 - View
Carya illinoinensis CiPaw.01G216200 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Chr01 - View
Citrullus lanatus ClCG09G001130 RNA-binding protein CG_Chr09 + View
Citrullus lanatus ClCG11G001340 RNA-binding protein CG_Chr11 - View
Citrullus lanatus ClCG07G014480 RNA-binding protein CG_Chr07 - View
Cucumis melo MELO3C024335.2 oligouridylate-binding protein 1B-like chr01 - View
Cucumis melo MELO3C004666.2 oligouridylate-binding protein 1-like chr05 + View
Carica papaya Cpa.g.sc25.147 supercontig_25 + View
Chenopodium quinoa AUR62009920 UBP1B: Oligouridylate-binding protein 1B C_Quinoa_Scaffold_2493 + View
Chenopodium quinoa AUR62001445 UBP1B: Oligouridylate-binding protein 1B C_Quinoa_Scaffold_2716 - View
Capsella rubella Carub.0001s1714 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) scaffold_1 - View
Capsella rubella Carub.0003s1371 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) scaffold_3 + View
Cucumis sativus L. CsaV3_7G034260 Oligouridylate-binding protein like chr7 - View
Davidia involucrata Dinv42417 GWHABJS00000013 + View
Davidia involucrata Dinv20410 GWHABJS00000019 + View
Davidia involucrata Dinv37847 GWHABJS00000006 + View
Durio zibethinus Duzib235G1483 NW_019167982.1 + View
Durio zibethinus Duzib187G1491 NW_019167860.1 + View
Durio zibethinus Duzib192G0442 NW_019168037.1 - View
Durio zibethinus Duzib160G0809 NW_019168015.1 + View
Durio zibethinus Duzib150G1299 NW_019167882.1 - View
Erigeron canadensis ECA247G0180 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA234G1706 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.J02729 Chr10 - View
Erythranthe guttata Migut.I01105 scaffold_9 + View
Erythranthe guttata Migut.D00925 scaffold_4 - View
Eutrema salsugineum Thhalv10020804m.g scaffold_13 - View
Eutrema salsugineum Thhalv10007746m.g K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) scaffold_5 + View
Fragaria x ananassa FAN02G0805 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Fvb6-4 + View
Fragaria x ananassa FAN14G4947 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Fvb6-1 - View
Fragaria vesca FvH4_6g35150 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Fvb6 + View
Gossypium hirsutum Gohir.D10G058000 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) D10 + View
Gossypium hirsutum Gohir.A06G193800 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) A06 + View
Gossypium hirsutum Gohir.A05G138900 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) A05 - View
Gossypium hirsutum Gohir.A10G056100 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) A10 + View
Gossypium hirsutum Gohir.D05G141100 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) D05 - View
Gossypium hirsutum Gohir.D06G201600 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) D06 + View
Glycine max Glyma.07G041500 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Gm07 + View
Glycine max Glyma.16G010100 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Gm16 + View
Gossypium raimondii Gorai.009G145300 Chr09 - View
Gossypium raimondii Gorai.010G235400 Chr10 + View
Gossypium raimondii Gorai.011G062100 Chr11 + View
Helianthus annuus HanXRQChr12g0360191 Putative nucleotide-binding alpha-beta plait domain HanXRQChr12 - View
Lupinus albus Lalb_Chr10g0101341 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Lalb_Chr10 - View
Lotus japonicus Lj3g0004026 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) chr3 + View
Lonicera japonica Lj9C534G6 GWHAAZE00000009 + View
Lonicera japonica Lj5C32G11 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_5_137001 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Lsat_1_v8_lg_5 + View
Malus domestica MD09G1178500 oligouridylate binding protein 1B Chr09 - View
Malus domestica MD17G1148300 oligouridylate binding protein 1B Chr17 + View
Manihot esculenta Manes.11G016600 Chromosome11 - View
Manihot esculenta Manes.04G148000 Chromosome04 + View
Medicago truncatula Medtr8g022050 nucleolysin TIAR-like protein chr8 + View
Nelumbo nucifera Nn6g35675 chr6 - View
Olea europaea Oeu000392.1 chr17 - View
Petunia axillaris Peaxi162Scf00038g01947 oligouridylate binding protein 1B Peaxi162Scf00038 - View
Petunia axillaris Peaxi162Scf00207g01530 oligouridylate binding protein 1B Peaxi162Scf00207 + View
Punica granatum PGR119G0971 NC_045132.1 + View
Prunus persica Prupe.3G037700 Pp03 - View
Pisum sativum Psat4g167280 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr4LG4 + View
Populus trichocarpa Potri.001G166100 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Chr01 - View
Populus trichocarpa Potri.003G069000 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Chr03 + View
Phaseolus vulgaris Phvul.010G127300 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Chr10 - View
Quercus lobata QL05p003768 5 - View
Rosa chinensis RcHm_v2.0_Chr2g0146411 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0241100 chr08 + View
Rhododendron simsii Rhsim12G0211600 chr12 + View
Striga asiatica SGA_v2.0_scaffold122G33318 scaffold122 - View
Striga asiatica SGA_v2.0_scaffold21G09530 scaffold21 + View
Salvia bowleyana SalBow6G1215 GWHASIU00000002 + View
Salix brachista Sabra01G0127200 GWHAAZH00000001 + View
Salix brachista Sabra03G0040500 GWHAAZH00000003 + View
Simmondsia chinensis Sc15g0000570 GWHAASQ00000015 + View
Simmondsia chinensis Sc12g0010790 GWHAASQ00000012 + View
Sechium edule Sed0024915 LG03 + View
Sechium edule Sed0024752 LG09 - View
Solanum lycopersicum Solyc06g063000.3 Oligouridylate-binding protein 1A (AHRD V3.3 *** A0A2G3C8H4_CAPCH) SL4.0ch06 + View
Schrenkiella parvula Sp1g15520 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) ch1-1 - View
Schrenkiella parvula Sp3g12360 K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) ch3-1 + View
Solanum pennellii Sopen06g022450 oligouridylate binding protein 1B (UBP1B) | FUNCTIONS IN: mRNA 3-UTR binding | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400004865 Oligouridylate binding protein ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400022889 Oligouridylate binding protein ST4.03ch03 - View
Selenicereus undatus Hund18676 Scaffold_33675 - View
Trochodendron aralioides TAR624G0070 group9 - View
Theobroma cacao Thecc.06G124100 RNA-binding family protein Chromosome_6 + View
Tarenaya hassleriana THA.LOC104808067 oligouridylate-binding protein 1B NW_010964598.1 - View
Tarenaya hassleriana THA.LOC104812263 oligouridylate-binding protein 1B NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104810373 oligouridylate-binding protein 1B-like NW_010965216.1 + View
Tripterygium wilfordii TWI59G0996 NC_052248.1 - View
Vaccinium macrocarpon vmacro22024 Similar to UBP1B: Oligouridylate-binding protein 1B (Arabidopsis thaliana OX%3D3702) scaffold00289_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro15053 Similar to UBP1B: Oligouridylate-binding protein 1B (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G0869 CM024078.1 + View
Vitis vinifera GSVIVG01016720001 chr9 - View