Gene: Solyc06g063000.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g063000.3
- Transcript Identifier Solyc06g063000.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 37419737-37424829 : positive
Gene Family Information
- ID HOM05D001722
- #Genes/#Species 376/95
- Phylogenetic origin
- ID ORTHO05D001910
- #Genes/#Species 338/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc06g063000.3.1
- uniprot A0A3Q7GY69
- gene_id Solyc06g063000
Descriptions
- Description Oligouridylate-binding protein 1A (AHRD V3.3 *** A0A2G3C8H4_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0034063 | ISO | PLAZA Integrative Orthology | stress granule assembly | AT3G14100 |
| GO:0071456 | ISO | PLAZA Integrative Orthology | cellular response to hypoxia | AT3G14100 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003729 | IBA | GOA Database | mRNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G54080 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G14100 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G14100 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.8.3 | RNA processing.mRNA sequestration.mRNA-binding regulatory factor (UBP1) |