Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CiPaw.08G137300 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Chr08 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G13190 LG-6 - View
Acer truncatum Atru.chr3.736 chr3 + View
Actinidia chinensis Actinidia26104 Lachesis_group25 + View
Actinidia chinensis Actinidia19224 Lachesis_group8 - View
Arabidopsis lyrata AL7G14700 scaffold_7 + View
Amaranthus hybridus Ah.02g124860 CDK5RAP1-like protein AmaHy_arrow1_Scaffold_2 - View
Aquilegia oxysepala Aqoxy6G01205 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2QU4I0 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CH6R50 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT4G36390 Methylthiotransferase Methylthiotransferase%3B FUNCTIONS IN: 4 iron%2C 4 sulfur cluster binding%2C iron-sulfur cluster binding%2C transferase activity%2C catalytic activity%3B INVOLVED IN: RNA modification%2C tRNA modification%3B LOCATED IN: chloroplast%2C cytoplasm%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Methylthiotransferase (InterPro:IPR005839)%2C tRNA-i(6)A37 modification enzyme MiaB (InterPro:IPR006463)%2C Methylthiotransferase%2C conserved site (InterPro:IPR020612)%2C Elongator protein 3/MiaB/NifB (InterPro:IPR006638)%2C Methylthiotransferase%2C N-terminal (InterPro:IPR013848)%2C Radical SAM (InterPro:IPR007197)%2C Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792)%3B BEST Arabidopsis thaliana protein match is: Methylthiotransferase (TAIR:AT1G72090.1)%3B Has 15610 Blast hits to 15591 proteins in 2425 species: Archae - 356%3B Bacteria - 9631%3B Metazoa - 288%3B Fungi - 1%3B Plants - 108%3B Viruses - 0%3B Other Eukaryotes - 5226 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaNung00735 Contig350 + View
Brassica napus C01p02640 C01 + View
Brassica napus A01p02440 A01 + View
Brassica oleracea BolC1t00252H C1 + View
Brassica rapa BraA01t00231Z A01 + View
Beta vulgaris EL10As8g23879 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Scaffold_0008 - View
Camellia sinensis var. sinensis CSS0001212 unnamed protein product [Vitis vinifera] Contig579 - View
Camellia sinensis var. sinensis CSS0012535 PREDICTED: CDK5RAP1-like protein isoform X1 [Vitis vinifera] Chr2 + View
Capsicum annuum CAN.G358.24 PGAv.1.6.scaffold358 - View
Cannabis sativa CANSAT01G2101 NC_044373.1 + View
Cicer arietinum L. Ca_24888_v3 Ca_LG8_v3 - View
Corylus avellana Haze_03834 Similar to At4g36390: CDK5RAP1-like protein (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc07_g10160 CDK5RAP1-like protein chr7 + View
Citrus clementina Ciclev10026963m.g scaffold_7 - View
Carpinus fangiana Cfa006916 Cfa02 + View
Cardamine hirsuta CARHR244720 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB Chr7 - View
Corchorus olitorius COL.COLO4_21994 hypothetical protein AWUE01017842.1 - View
Carica papaya Cpa.g.sc6.187 supercontig_6 + View
Chenopodium quinoa AUR62007629 At4g36390: CDK5RAP1-like protein C_Quinoa_Scaffold_2646 + View
Chenopodium quinoa AUR62004114 At4g36390: CDK5RAP1-like protein C_Quinoa_Scaffold_2370 + View
Capsella rubella Carub.0007s0392 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase scaffold_7 + View
Daucus carota DCAR_025977 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv40035 GWHABJS00000014 - View
Durio zibethinus Duzib147G0212 NW_019168470.1 + View
Erigeron canadensis ECA246G1708 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.I02387 Chr09 - View
Erythranthe guttata Migut.H02505 scaffold_8 - View
Eutrema salsugineum Thhalv10024669m.g scaffold_1 + View
Fragaria x ananassa FAN23G0223 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Fvb1-3 + View
Fragaria x ananassa FAN19G0981 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Fvb1-4 + View
Fragaria x ananassa FAN28G0908 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Fvb1-1 - View
Fragaria x ananassa FAN26G0755 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Fvb1-2 + View
Fragaria vesca FvH4_1g12320 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Fvb1 + View
Gossypium hirsutum Gohir.D10G091300 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase D10 - View
Gossypium hirsutum Gohir.A11G180828 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase A11 - View
Gossypium hirsutum Gohir.D11G187400 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase D11 - View
Gossypium hirsutum Gohir.A10G096800 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase A10 + View
Glycine max Glyma.11G073400 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Gm11 - View
Glycine max Glyma.01G169900 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Gm01 + View
Gossypium raimondii Gorai.007G199300 Chr07 - View
Gossypium raimondii Gorai.011G100300 Chr11 - View
Lupinus albus Lalb_Chr09g0322051 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Lalb_Chr09 + View
Lotus japonicus Lj2g0018934 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase chr2 - View
Lonicera japonica Lj4A210T33 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_3_75100 Lsat_1_v8_lg_3 - View
Malus domestica MD02G1137900 Methylthiotransferase Chr02 - View
Malus domestica MD15G1251600 Methylthiotransferase Chr15 - View
Manihot esculenta Manes.01G140600 Chromosome01 - View
Medicago truncatula Medtr5g021230 radical SAM methylthiotransferase, MiaB/RimO family protein chr5 - View
Nelumbo nucifera Nn5g29726 chr5 + View
Nicotiana tabacum Nitab4.5_0000723g0070 TRAM domain, Methylthiotransferase, N-terminal, Elongator protein 3/MiaB/NifB, Radical SAM, Methylthiotransferase, Methylthiotransferase/radical SAM-type protein, Radical SAM, alpha/beta horseshoe, Methylthiotransferase, conserved site Nitab4.5_0000723 - View
Petunia axillaris Peaxi162Scf00084g01021 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB Peaxi162Scf00084 + View
Punica granatum PGR119G0558 NC_045132.1 - View
Prunus persica Prupe.7G162800 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Pp07 + View
Papaver somniferum PSO675G8014 NC_039358.1 + View
Papaver somniferum PSO541G2997 NC_039363.1 + View
Populus trichocarpa Potri.007G018500 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Chr07 - View
Phaseolus vulgaris Phvul.002G167500 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Chr02 - View
Quercus lobata QL10p007406 10 - View
Quercus lobata QL06p034813 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0100141 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0123500 chr08 + View
Striga asiatica SGA_v2.0_scaffold280G46864 scaffold280 - View
Salix brachista Sabra07G0015600 GWHAAZH00000007 - View
Simmondsia chinensis Sc03g0003270 GWHAASQ00000003 + View
Solanum lycopersicum Solyc02g084750.4 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (AHRD V3.3 *** A0A2N3V1C6_9BACT) SL4.0ch02 - View
Schrenkiella parvula Sp7g34050 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase ch7-6 - View
Solanum pennellii Sopen02g029420 Methylthiotransferase | FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, transferase activity, catalytic activity | INVOLVED IN: RNA modification, tRNA modification | LOCATED IN: chloroplast, cytoplasm | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Methylthiotransferase , tRNA-i(6)A37 modification enzyme MiaB , Methylthiotransferase, conserved site , Elongator protein 3/MiaB/NifB , Methylthiotransferase, N-terminal , Radical SAM , Deoxyribonuclease/rho motif-related TRAM | BEST Arabidopsis thaliana protein match is: Methylthiotransferase Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400003535 CDK5 regulatory subunit-associated protein ST4.03ch02 - View
Selenicereus undatus Hund14013 Scaffold_33679 + View
Trochodendron aralioides TAR625G0763 group4 - View
Trochodendron aralioides TAR381G0456 group11 - View
Theobroma cacao Thecc.01G026500 Methylthiotransferase Chromosome_1 - View
Tarenaya hassleriana THA.LOC104807475 CDK5RAP1-like protein isoform X2 NW_010963495.1 + View
Trifolium pratense TPR.G2393 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI73G0944 NC_052232.1 + View
Vaccinium macrocarpon vmacro17728 Similar to At4g36390: CDK5RAP1-like protein (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G3191 CM024074.1 - View
Vitis vinifera GSVIVG01018858001 chr4 + View