Gene: AT4G36390

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G36390
  • Transcript Identifier AT4G36390.1
  • Gene Type Coding gene
  • Location Chr4 : 17194746-17197054 : negative

Gene Family Information

  • ID HOM05D006078
  • #Genes/#Species 130/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G36390.1
  • uniprot Q8H0V1

Descriptions

  • Description Methylthiotransferase
  • Computational description Methylthiotransferase; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, transferase activity, catalytic activity; INVOLVED IN: RNA modification, tRNA modification; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methylthiotransferase (InterPro:IPR005839), tRNA-i(6)A37 modification enzyme MiaB (InterPro:IPR006463), Methylthiotransferase, conserved site (InterPro:IPR020612), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Methylthiotransferase, N-terminal (InterPro:IPR013848), Radical SAM (InterPro:IPR007197), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: Methylthiotransferase (TAIR:AT1G72090.1); Has 15610 Blast hits to 15591 proteins in 2425 species: Archae - 356; Bacteria - 9631; Metazoa - 288; Fungi - 1; Plants - 108; Viruses - 0; Other Eukaryotes - 5226 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006400
IEA
GOA DatabasetRNA modification
GO:0006400
IEA
InterProtRNA modification
GO:0000079
ISS
Gene Ontologyregulation of cyclin-dependent protein serine/threonine kinase activity
GO:0035600
IEA
GOA DatabasetRNA methylthiolation
GO:0045736
IBA
Gene Ontologynegative regulation of cyclin-dependent protein serine/threonine kinase activity1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0035596
IEA
GOA Databasemethylthiotransferase activity
GO:0035596
IEA
InterPromethylthiotransferase activity
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016740
IEA
InterProtransferase activity
GO:0035597
IBA
Gene OntologyN6-isopentenyladenosine methylthiotransferase activity1
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IBA
Gene Ontologycytosol1
GO:0005739
IBA
Gene Ontologymitochondrion1
GO:0005575
ND
Gene Ontologycellular_component

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB
IPR002792 TRAM domain
IPR038135 Methylthiotransferase, N-terminal domain superfamily
IPR005839 Methylthiotransferase
IPR007197 Radical SAM
IPR013848 Methylthiotransferase, N-terminal
IPR023404 Radical SAM, alpha/beta horseshoe
IPR006638 Elp3/MiaB/NifB
Mapman id Description
35.1 not assigned.annotated